Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.7■□□□□ 0.9
HMGA2P52926 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMGA2P52926 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.7■□□□□ 0.9
HMGA2P52926 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HMGA2P52926 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HMGA2P52926 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMGA2P52926 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HMGA2P52926 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HMGA2P52926 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HMGA2P52926 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HMGA2P52926 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMGA2P52926 ABHD17AP3-201ENST00000503096 1137 ntBASIC20.69■□□□□ 0.9
HMGA2P52926 AC022616.5-201ENST00000518796 181 ntBASIC20.69■□□□□ 0.9
HMGA2P52926 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HMGA2P52926 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMGA2P52926 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.69■□□□□ 0.9
HMGA2P52926 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
HMGA2P52926 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.69■□□□□ 0.9
HMGA2P52926 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HMGA2P52926 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.68■□□□□ 0.9
HMGA2P52926 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGA2P52926 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGA2P52926 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGA2P52926 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HMGA2P52926 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HMGA2P52926 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
HMGA2P52926 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.68■□□□□ 0.9
HMGA2P52926 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGA2P52926 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGA2P52926 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGA2P52926 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGA2P52926 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGA2P52926 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGA2P52926 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGA2P52926 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HMGA2P52926 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.67■□□□□ 0.9
HMGA2P52926 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGA2P52926 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.67■□□□□ 0.9
HMGA2P52926 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.67■□□□□ 0.9
HMGA2P52926 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGA2P52926 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGA2P52926 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.67■□□□□ 0.9
HMGA2P52926 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HMGA2P52926 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGA2P52926 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
HMGA2P52926 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
HMGA2P52926 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.66■□□□□ 0.9
HMGA2P52926 AC079630.1-202ENST00000618127 1840 ntBASIC20.66■□□□□ 0.9
HMGA2P52926 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HMGA2P52926 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.66■□□□□ 0.9
HMGA2P52926 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGA2P52926 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.65■□□□□ 0.9
HMGA2P52926 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGA2P52926 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGA2P52926 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMGA2P52926 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGA2P52926 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.65■□□□□ 0.9
HMGA2P52926 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMGA2P52926 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.65■□□□□ 0.9
HMGA2P52926 AC129492.7-201ENST00000622992 756 ntBASIC20.65■□□□□ 0.9
HMGA2P52926 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.65■□□□□ 0.9
HMGA2P52926 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.65■□□□□ 0.9
HMGA2P52926 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HMGA2P52926 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HMGA2P52926 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HMGA2P52926 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HMGA2P52926 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HMGA2P52926 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HMGA2P52926 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HMGA2P52926 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
HMGA2P52926 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HMGA2P52926 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGA2P52926 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMGA2P52926 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMGA2P52926 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.64■□□□□ 0.89
HMGA2P52926 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.64■□□□□ 0.89
HMGA2P52926 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
HMGA2P52926 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGA2P52926 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HMGA2P52926 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMGA2P52926 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.64■□□□□ 0.89
HMGA2P52926 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HMGA2P52926 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGA2P52926 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.63■□□□□ 0.89
HMGA2P52926 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
HMGA2P52926 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGA2P52926 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGA2P52926 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HMGA2P52926 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGA2P52926 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGA2P52926 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HMGA2P52926 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HMGA2P52926 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HMGA2P52926 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HMGA2P52926 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGA2P52926 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.62■□□□□ 0.89
HMGA2P52926 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGA2P52926 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HMGA2P52926 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.62■□□□□ 0.89
HMGA2P52926 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms