Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
RFC3P40938 SERBP1P1-201ENST00000396021 1160 ntBASIC20.64■□□□□ 0.89
RFC3P40938 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.64■□□□□ 0.89
RFC3P40938 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RFC3P40938 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RFC3P40938 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC3P40938 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RFC3P40938 C17orf82-201ENST00000623772 1530 ntBASIC20.63■□□□□ 0.89
RFC3P40938 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFC3P40938 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.63■□□□□ 0.89
RFC3P40938 ZNRF2P3-201ENST00000424200 374 ntBASIC20.63■□□□□ 0.89
RFC3P40938 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.63■□□□□ 0.89
RFC3P40938 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.63■□□□□ 0.89
RFC3P40938 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC3P40938 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC3P40938 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC3P40938 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC3P40938 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC3P40938 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RFC3P40938 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RFC3P40938 AL161729.1-201ENST00000604104 1402 ntBASIC20.62■□□□□ 0.89
RFC3P40938 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC3P40938 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC3P40938 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.62■□□□□ 0.89
RFC3P40938 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.62■□□□□ 0.89
RFC3P40938 AC006455.2-201ENST00000429931 906 ntBASIC20.62■□□□□ 0.89
RFC3P40938 DUX4L19-201ENST00000557448 1267 ntBASIC20.62■□□□□ 0.89
RFC3P40938 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.62■□□□□ 0.89
RFC3P40938 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.62■□□□□ 0.89
RFC3P40938 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC3P40938 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RFC3P40938 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC3P40938 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RFC3P40938 SUDS3P1-201ENST00000505831 966 ntBASIC20.61■□□□□ 0.89
RFC3P40938 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.61■□□□□ 0.89
RFC3P40938 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
RFC3P40938 MIR4767-201ENST00000582827 78 ntBASIC20.61■□□□□ 0.89
RFC3P40938 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RFC3P40938 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC3P40938 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC3P40938 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC3P40938 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RFC3P40938 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.61■□□□□ 0.89
RFC3P40938 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.61■□□□□ 0.89
RFC3P40938 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC3P40938 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
RFC3P40938 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
RFC3P40938 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RFC3P40938 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFC3P40938 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.6■□□□□ 0.89
RFC3P40938 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RFC3P40938 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.6■□□□□ 0.89
RFC3P40938 AF213884.3-201ENST00000563833 479 ntBASIC20.6■□□□□ 0.89
RFC3P40938 AC092171.4-201ENST00000609130 632 ntBASIC20.6■□□□□ 0.89
RFC3P40938 AL355001.2-201ENST00000620617 1191 ntBASIC20.6■□□□□ 0.89
RFC3P40938 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
RFC3P40938 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.6■□□□□ 0.89
RFC3P40938 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.6■□□□□ 0.89
RFC3P40938 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC3P40938 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RFC3P40938 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC3P40938 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC3P40938 EDA-201ENST00000338901 1233 ntBASIC20.59■□□□□ 0.89
RFC3P40938 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RFC3P40938 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RFC3P40938 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.59■□□□□ 0.89
RFC3P40938 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.59■□□□□ 0.89
RFC3P40938 RARA-203ENST00000394086 2008 ntTSL 2 BASIC20.59■□□□□ 0.89
RFC3P40938 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RFC3P40938 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
RFC3P40938 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC20.59■□□□□ 0.89
RFC3P40938 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFC3P40938 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
RFC3P40938 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.58■□□□□ 0.89
RFC3P40938 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
RFC3P40938 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.58■□□□□ 0.89
RFC3P40938 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.58■□□□□ 0.89
RFC3P40938 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.58■□□□□ 0.88
RFC3P40938 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RFC3P40938 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.57■□□□□ 0.88
RFC3P40938 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFC3P40938 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
RFC3P40938 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.57■□□□□ 0.88
RFC3P40938 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFC3P40938 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RFC3P40938 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFC3P40938 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFC3P40938 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFC3P40938 AP001330.3-201ENST00000520123 633 ntBASIC20.56■□□□□ 0.88
RFC3P40938 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.56■□□□□ 0.88
RFC3P40938 AC009086.3-201ENST00000623486 1008 ntBASIC20.56■□□□□ 0.88
RFC3P40938 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
RFC3P40938 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.56■□□□□ 0.88
RFC3P40938 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFC3P40938 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFC3P40938 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
RFC3P40938 AL136967.2-201ENST00000623968 743 ntBASIC20.55■□□□□ 0.88
RFC3P40938 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
RFC3P40938 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
RFC3P40938 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms