Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.86■□□□□ 0.93
LCN1P31025 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LCN1P31025 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LCN1P31025 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LCN1P31025 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LCN1P31025 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.85■□□□□ 0.93
LCN1P31025 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
LCN1P31025 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.85■□□□□ 0.93
LCN1P31025 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LCN1P31025 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
LCN1P31025 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LCN1P31025 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LCN1P31025 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LCN1P31025 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LCN1P31025 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LCN1P31025 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC20.84■□□□□ 0.93
LCN1P31025 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LCN1P31025 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LCN1P31025 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LCN1P31025 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
LCN1P31025 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LCN1P31025 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
LCN1P31025 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LCN1P31025 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LCN1P31025 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
LCN1P31025 GUSBP5-201ENST00000418136 578 ntBASIC20.83■□□□□ 0.93
LCN1P31025 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.83■□□□□ 0.93
LCN1P31025 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.83■□□□□ 0.93
LCN1P31025 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LCN1P31025 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.83■□□□□ 0.93
LCN1P31025 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LCN1P31025 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.83■□□□□ 0.92
LCN1P31025 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
LCN1P31025 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LCN1P31025 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.82■□□□□ 0.92
LCN1P31025 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LCN1P31025 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LCN1P31025 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LCN1P31025 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.82■□□□□ 0.92
LCN1P31025 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LCN1P31025 TSPY9P-201ENST00000440215 945 ntBASIC20.82■□□□□ 0.92
LCN1P31025 TSPY11P-201ENST00000442607 1045 ntBASIC20.82■□□□□ 0.92
LCN1P31025 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LCN1P31025 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.82■□□□□ 0.92
LCN1P31025 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LCN1P31025 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
LCN1P31025 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LCN1P31025 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LCN1P31025 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LCN1P31025 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LCN1P31025 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LCN1P31025 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.81■□□□□ 0.92
LCN1P31025 UNC93B8-201ENST00000511903 705 ntBASIC20.81■□□□□ 0.92
LCN1P31025 MIR6724-1-201ENST00000616420 92 ntBASIC20.81■□□□□ 0.92
LCN1P31025 MIR6724-2-201ENST00000616483 92 ntBASIC20.81■□□□□ 0.92
LCN1P31025 MIR6724-4-201ENST00000617390 92 ntBASIC20.81■□□□□ 0.92
LCN1P31025 MIR6724-3-201ENST00000622482 92 ntBASIC20.81■□□□□ 0.92
LCN1P31025 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LCN1P31025 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
LCN1P31025 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LCN1P31025 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LCN1P31025 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
LCN1P31025 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.81■□□□□ 0.92
LCN1P31025 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LCN1P31025 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
LCN1P31025 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LCN1P31025 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LCN1P31025 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LCN1P31025 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LCN1P31025 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LCN1P31025 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LCN1P31025 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LCN1P31025 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.8■□□□□ 0.92
LCN1P31025 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.79■□□□□ 0.92
LCN1P31025 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LCN1P31025 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LCN1P31025 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.79■□□□□ 0.92
LCN1P31025 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LCN1P31025 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LCN1P31025 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.79■□□□□ 0.92
LCN1P31025 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.79■□□□□ 0.92
LCN1P31025 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
LCN1P31025 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LCN1P31025 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.78■□□□□ 0.92
LCN1P31025 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
LCN1P31025 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
LCN1P31025 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
LCN1P31025 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LCN1P31025 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.78■□□□□ 0.92
LCN1P31025 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.78■□□□□ 0.92
LCN1P31025 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.78■□□□□ 0.92
LCN1P31025 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.78■□□□□ 0.92
LCN1P31025 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
LCN1P31025 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LCN1P31025 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.78■□□□□ 0.92
LCN1P31025 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.78■□□□□ 0.92
LCN1P31025 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LCN1P31025 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LCN1P31025 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LCN1P31025 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms