Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CD40P25942 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD40P25942 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD40P25942 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CD40P25942 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CD40P25942 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CD40P25942 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CD40P25942 EDA-201ENST00000338901 1233 ntBASIC19.53■□□□□ 0.72
CD40P25942 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.53■□□□□ 0.72
CD40P25942 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.53■□□□□ 0.72
CD40P25942 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.53■□□□□ 0.72
CD40P25942 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.53■□□□□ 0.72
CD40P25942 LINC00543-201ENST00000567234 1845 ntBASIC19.53■□□□□ 0.72
CD40P25942 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.53■□□□□ 0.72
CD40P25942 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD40P25942 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.52■□□□□ 0.72
CD40P25942 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
CD40P25942 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD40P25942 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC19.52■□□□□ 0.72
CD40P25942 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CD40P25942 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CD40P25942 AC142381.2-201ENST00000566120 298 ntBASIC19.52■□□□□ 0.72
CD40P25942 AL138724.1-201ENST00000606771 1088 ntBASIC19.52■□□□□ 0.72
CD40P25942 AL355001.2-201ENST00000620617 1191 ntBASIC19.52■□□□□ 0.72
CD40P25942 AC009086.3-201ENST00000623486 1008 ntBASIC19.52■□□□□ 0.72
CD40P25942 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CD40P25942 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.51■□□□□ 0.71
CD40P25942 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD40P25942 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC19.51■□□□□ 0.71
CD40P25942 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CD40P25942 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.51■□□□□ 0.71
CD40P25942 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD40P25942 AL139125.2-201ENST00000623134 1869 ntBASIC19.51■□□□□ 0.71
CD40P25942 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD40P25942 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD40P25942 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD40P25942 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CD40P25942 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD40P25942 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CD40P25942 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
CD40P25942 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD40P25942 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD40P25942 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.5■□□□□ 0.71
CD40P25942 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.5■□□□□ 0.71
CD40P25942 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
CD40P25942 AL031432.3-201ENST00000607698 485 ntBASIC19.5■□□□□ 0.71
CD40P25942 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.5■□□□□ 0.71
CD40P25942 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CD40P25942 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CD40P25942 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.5■□□□□ 0.71
CD40P25942 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.49■□□□□ 0.71
CD40P25942 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD40P25942 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CD40P25942 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD40P25942 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.49■□□□□ 0.71
CD40P25942 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CD40P25942 AC006455.2-201ENST00000429931 906 ntBASIC19.49■□□□□ 0.71
CD40P25942 SUDS3P1-201ENST00000505831 966 ntBASIC19.49■□□□□ 0.71
CD40P25942 MIR4767-201ENST00000582827 78 ntBASIC19.49■□□□□ 0.71
CD40P25942 AC011298.3-201ENST00000615796 283 ntBASIC19.49■□□□□ 0.71
CD40P25942 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CD40P25942 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CD40P25942 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD40P25942 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD40P25942 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CD40P25942 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD40P25942 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.48■□□□□ 0.71
CD40P25942 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CD40P25942 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.48■□□□□ 0.71
CD40P25942 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CD40P25942 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.48■□□□□ 0.71
CD40P25942 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CD40P25942 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD40P25942 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD40P25942 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CD40P25942 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.47■□□□□ 0.71
CD40P25942 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CD40P25942 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD40P25942 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CD40P25942 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.47■□□□□ 0.71
CD40P25942 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CD40P25942 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD40P25942 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD40P25942 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD40P25942 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.46■□□□□ 0.71
CD40P25942 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD40P25942 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC19.46■□□□□ 0.71
CD40P25942 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD40P25942 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD40P25942 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CD40P25942 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.46■□□□□ 0.71
CD40P25942 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.46■□□□□ 0.71
CD40P25942 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CD40P25942 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.46■□□□□ 0.71
CD40P25942 MIR3181-201ENST00000578512 73 ntBASIC19.46■□□□□ 0.71
CD40P25942 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.46■□□□□ 0.71
CD40P25942 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD40P25942 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD40P25942 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD40P25942 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms