Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
COL8A2P25067 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.09■□□□□ 0.65
COL8A2P25067 SYT6-210ENST00000641643 1587 ntBASIC19.09■□□□□ 0.65
COL8A2P25067 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.09■□□□□ 0.65
COL8A2P25067 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COL8A2P25067 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.08■□□□□ 0.65
COL8A2P25067 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL8A2P25067 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
COL8A2P25067 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
COL8A2P25067 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
COL8A2P25067 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
COL8A2P25067 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.08■□□□□ 0.64
COL8A2P25067 AC092171.4-201ENST00000609130 632 ntBASIC19.08■□□□□ 0.64
COL8A2P25067 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL8A2P25067 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
COL8A2P25067 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL8A2P25067 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.07■□□□□ 0.64
COL8A2P25067 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL8A2P25067 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.07■□□□□ 0.64
COL8A2P25067 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL8A2P25067 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL8A2P25067 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.07■□□□□ 0.64
COL8A2P25067 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
COL8A2P25067 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.07■□□□□ 0.64
COL8A2P25067 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL8A2P25067 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
COL8A2P25067 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
COL8A2P25067 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL8A2P25067 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL8A2P25067 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
COL8A2P25067 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COL8A2P25067 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL8A2P25067 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL8A2P25067 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.06■□□□□ 0.64
COL8A2P25067 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COL8A2P25067 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL8A2P25067 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL8A2P25067 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL8A2P25067 SERBP1P1-201ENST00000396021 1160 ntBASIC19.05■□□□□ 0.64
COL8A2P25067 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COL8A2P25067 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.05■□□□□ 0.64
COL8A2P25067 AL031432.3-201ENST00000607698 485 ntBASIC19.05■□□□□ 0.64
COL8A2P25067 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL8A2P25067 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC19.05■□□□□ 0.64
COL8A2P25067 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL8A2P25067 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COL8A2P25067 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.05■□□□□ 0.64
COL8A2P25067 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL8A2P25067 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL8A2P25067 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL8A2P25067 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.04■□□□□ 0.64
COL8A2P25067 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COL8A2P25067 MIR935-201ENST00000401179 91 ntBASIC19.04■□□□□ 0.64
COL8A2P25067 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL8A2P25067 AC142381.2-201ENST00000566120 298 ntBASIC19.04■□□□□ 0.64
COL8A2P25067 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
COL8A2P25067 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.04■□□□□ 0.64
COL8A2P25067 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.04■□□□□ 0.64
COL8A2P25067 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
COL8A2P25067 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COL8A2P25067 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL8A2P25067 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.03■□□□□ 0.64
COL8A2P25067 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL8A2P25067 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.03■□□□□ 0.64
COL8A2P25067 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL8A2P25067 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL8A2P25067 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL8A2P25067 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL8A2P25067 SUDS3P1-201ENST00000505831 966 ntBASIC19.03■□□□□ 0.64
COL8A2P25067 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.03■□□□□ 0.64
COL8A2P25067 AC241377.3-202ENST00000626088 1088 ntBASIC19.03■□□□□ 0.64
COL8A2P25067 AC241585.3-202ENST00000628937 1088 ntBASIC19.03■□□□□ 0.64
COL8A2P25067 AC245100.8-202ENST00000629247 1058 ntBASIC19.03■□□□□ 0.64
COL8A2P25067 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
COL8A2P25067 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL8A2P25067 LINC01124-201ENST00000409786 2117 ntBASIC19.03■□□□□ 0.64
COL8A2P25067 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
COL8A2P25067 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
COL8A2P25067 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.03■□□□□ 0.64
COL8A2P25067 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL8A2P25067 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
COL8A2P25067 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL8A2P25067 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL8A2P25067 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.02■□□□□ 0.64
COL8A2P25067 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.02■□□□□ 0.64
COL8A2P25067 AL355001.2-201ENST00000620617 1191 ntBASIC19.02■□□□□ 0.64
COL8A2P25067 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
COL8A2P25067 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
COL8A2P25067 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL8A2P25067 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL8A2P25067 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL8A2P25067 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
COL8A2P25067 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL8A2P25067 EDA-201ENST00000338901 1233 ntBASIC19.01■□□□□ 0.63
COL8A2P25067 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
COL8A2P25067 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.01■□□□□ 0.63
COL8A2P25067 AC006455.2-201ENST00000429931 906 ntBASIC19.01■□□□□ 0.63
COL8A2P25067 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.01■□□□□ 0.63
COL8A2P25067 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
COL8A2P25067 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms