Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RAB3BP20337 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RAB3BP20337 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
RAB3BP20337 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RAB3BP20337 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
RAB3BP20337 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RAB3BP20337 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
RAB3BP20337 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB3BP20337 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB3BP20337 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB3BP20337 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RAB3BP20337 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.76■□□□□ 0.75
RAB3BP20337 ESRRAP2-201ENST00000418437 1549 ntBASIC19.76■□□□□ 0.75
RAB3BP20337 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3BP20337 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3BP20337 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.75■□□□□ 0.75
RAB3BP20337 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3BP20337 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3BP20337 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3BP20337 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3BP20337 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3BP20337 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3BP20337 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.75■□□□□ 0.75
RAB3BP20337 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3BP20337 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3BP20337 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3BP20337 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3BP20337 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3BP20337 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3BP20337 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RAB3BP20337 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
RAB3BP20337 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB3BP20337 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
RAB3BP20337 AC007029.1-201ENST00000604183 313 ntBASIC19.74■□□□□ 0.75
RAB3BP20337 RAP2CP1-202ENST00000605179 643 ntBASIC19.74■□□□□ 0.75
RAB3BP20337 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB3BP20337 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.74■□□□□ 0.75
RAB3BP20337 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB3BP20337 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB3BP20337 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RAB3BP20337 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB3BP20337 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
RAB3BP20337 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RAB3BP20337 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RAB3BP20337 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3BP20337 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3BP20337 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RAB3BP20337 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RAB3BP20337 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3BP20337 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RAB3BP20337 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RAB3BP20337 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
RAB3BP20337 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB3BP20337 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.73■□□□□ 0.75
RAB3BP20337 AC026202.3-201ENST00000600805 1127 ntBASIC19.73■□□□□ 0.75
RAB3BP20337 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.73■□□□□ 0.75
RAB3BP20337 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
RAB3BP20337 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.73■□□□□ 0.75
RAB3BP20337 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.73■□□□□ 0.75
RAB3BP20337 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RAB3BP20337 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.72■□□□□ 0.75
RAB3BP20337 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.72■□□□□ 0.75
RAB3BP20337 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3BP20337 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3BP20337 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3BP20337 TPT1-202ENST00000379055 948 ntTSL 2 BASIC19.72■□□□□ 0.75
RAB3BP20337 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3BP20337 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.72■□□□□ 0.75
RAB3BP20337 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RAB3BP20337 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3BP20337 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3BP20337 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3BP20337 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3BP20337 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3BP20337 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RAB3BP20337 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
RAB3BP20337 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RAB3BP20337 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3BP20337 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3BP20337 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RAB3BP20337 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
RAB3BP20337 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
RAB3BP20337 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.71■□□□□ 0.75
RAB3BP20337 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB3BP20337 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB3BP20337 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.7■□□□□ 0.74
RAB3BP20337 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.7■□□□□ 0.74
RAB3BP20337 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RAB3BP20337 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB3BP20337 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.7■□□□□ 0.74
RAB3BP20337 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB3BP20337 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RAB3BP20337 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.7■□□□□ 0.74
RAB3BP20337 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
RAB3BP20337 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
RAB3BP20337 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.69■□□□□ 0.74
RAB3BP20337 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB3BP20337 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.69■□□□□ 0.74
RAB3BP20337 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RAB3BP20337 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms