Protein–RNA interactions for Protein: P16402

HIST1H1D, Histone H1.3, humanhuman

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1DP16402 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H1DP16402 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H1DP16402 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.16■□□□□ 0.66
HIST1H1DP16402 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.16■□□□□ 0.66
HIST1H1DP16402 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H1DP16402 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
HIST1H1DP16402 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
HIST1H1DP16402 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC19.16■□□□□ 0.66
HIST1H1DP16402 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H1DP16402 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.16■□□□□ 0.66
HIST1H1DP16402 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
HIST1H1DP16402 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H1DP16402 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H1DP16402 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.16■□□□□ 0.66
HIST1H1DP16402 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIST1H1DP16402 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H1DP16402 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H1DP16402 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H1DP16402 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H1DP16402 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.15■□□□□ 0.66
HIST1H1DP16402 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H1DP16402 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H1DP16402 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIST1H1DP16402 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.15■□□□□ 0.66
HIST1H1DP16402 RNF126P1-201ENST00000567452 1320 ntBASIC19.15■□□□□ 0.66
HIST1H1DP16402 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.15■□□□□ 0.66
HIST1H1DP16402 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HIST1H1DP16402 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HIST1H1DP16402 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HIST1H1DP16402 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.15■□□□□ 0.66
HIST1H1DP16402 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.15■□□□□ 0.66
HIST1H1DP16402 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
HIST1H1DP16402 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.14■□□□□ 0.66
HIST1H1DP16402 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
HIST1H1DP16402 AC011551.1-201ENST00000614101 683 ntBASIC19.14■□□□□ 0.65
HIST1H1DP16402 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
HIST1H1DP16402 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.14■□□□□ 0.65
HIST1H1DP16402 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIST1H1DP16402 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIST1H1DP16402 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H1DP16402 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H1DP16402 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H1DP16402 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H1DP16402 LONRF2P2-201ENST00000439212 571 ntBASIC19.13■□□□□ 0.65
HIST1H1DP16402 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H1DP16402 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HIST1H1DP16402 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H1DP16402 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.12■□□□□ 0.65
HIST1H1DP16402 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H1DP16402 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H1DP16402 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
HIST1H1DP16402 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
HIST1H1DP16402 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.12■□□□□ 0.65
HIST1H1DP16402 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H1DP16402 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H1DP16402 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H1DP16402 DUX4L9-201ENST00000449051 1259 ntBASIC19.12■□□□□ 0.65
HIST1H1DP16402 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H1DP16402 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H1DP16402 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H1DP16402 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HIST1H1DP16402 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HIST1H1DP16402 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.12■□□□□ 0.65
HIST1H1DP16402 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1DP16402 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1DP16402 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1DP16402 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1DP16402 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1DP16402 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1DP16402 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HIST1H1DP16402 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.11■□□□□ 0.65
HIST1H1DP16402 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H1DP16402 ESRRAP2-201ENST00000418437 1549 ntBASIC19.1■□□□□ 0.65
HIST1H1DP16402 AC137767.1-201ENST00000602918 1920 ntBASIC19.1■□□□□ 0.65
HIST1H1DP16402 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H1DP16402 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.1■□□□□ 0.65
HIST1H1DP16402 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H1DP16402 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H1DP16402 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HIST1H1DP16402 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H1DP16402 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.09■□□□□ 0.65
HIST1H1DP16402 AC242852.2-201ENST00000615738 1807 ntBASIC19.09■□□□□ 0.65
HIST1H1DP16402 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H1DP16402 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H1DP16402 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HIST1H1DP16402 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
HIST1H1DP16402 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H1DP16402 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H1DP16402 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H1DP16402 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HIST1H1DP16402 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HIST1H1DP16402 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST1H1DP16402 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST1H1DP16402 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST1H1DP16402 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.08■□□□□ 0.65
HIST1H1DP16402 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.08■□□□□ 0.65
HIST1H1DP16402 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST1H1DP16402 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
HIST1H1DP16402 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.08■□□□□ 0.65
HIST1H1DP16402 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms