Protein–RNA interactions for Protein: P0DPA2

VSIG8, V-set and immunoglobulin domain-containing protein 8, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG8P0DPA2 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VSIG8P0DPA2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VSIG8P0DPA2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VSIG8P0DPA2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VSIG8P0DPA2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
VSIG8P0DPA2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VSIG8P0DPA2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
VSIG8P0DPA2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VSIG8P0DPA2 ECEL1P1-201ENST00000373592 1742 ntBASIC19.32■□□□□ 0.68
VSIG8P0DPA2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
VSIG8P0DPA2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC19.32■□□□□ 0.68
VSIG8P0DPA2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.32■□□□□ 0.68
VSIG8P0DPA2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VSIG8P0DPA2 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
VSIG8P0DPA2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.32■□□□□ 0.68
VSIG8P0DPA2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.32■□□□□ 0.68
VSIG8P0DPA2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VSIG8P0DPA2 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VSIG8P0DPA2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
VSIG8P0DPA2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
VSIG8P0DPA2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.31■□□□□ 0.68
VSIG8P0DPA2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.31■□□□□ 0.68
VSIG8P0DPA2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
VSIG8P0DPA2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VSIG8P0DPA2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
VSIG8P0DPA2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
VSIG8P0DPA2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
VSIG8P0DPA2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
VSIG8P0DPA2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
VSIG8P0DPA2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.31■□□□□ 0.68
VSIG8P0DPA2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VSIG8P0DPA2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VSIG8P0DPA2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VSIG8P0DPA2 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.3■□□□□ 0.68
VSIG8P0DPA2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
VSIG8P0DPA2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
VSIG8P0DPA2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
VSIG8P0DPA2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.3■□□□□ 0.68
VSIG8P0DPA2 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.3■□□□□ 0.68
VSIG8P0DPA2 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.29■□□□□ 0.68
VSIG8P0DPA2 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.29■□□□□ 0.68
VSIG8P0DPA2 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.29■□□□□ 0.68
VSIG8P0DPA2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VSIG8P0DPA2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VSIG8P0DPA2 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VSIG8P0DPA2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.29■□□□□ 0.68
VSIG8P0DPA2 AC129492.7-201ENST00000622992 756 ntBASIC19.29■□□□□ 0.68
VSIG8P0DPA2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VSIG8P0DPA2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
VSIG8P0DPA2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
VSIG8P0DPA2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
VSIG8P0DPA2 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
VSIG8P0DPA2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.29■□□□□ 0.68
VSIG8P0DPA2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
VSIG8P0DPA2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.28■□□□□ 0.68
VSIG8P0DPA2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
VSIG8P0DPA2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VSIG8P0DPA2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VSIG8P0DPA2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.28■□□□□ 0.68
VSIG8P0DPA2 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
VSIG8P0DPA2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VSIG8P0DPA2 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VSIG8P0DPA2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
VSIG8P0DPA2 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VSIG8P0DPA2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
VSIG8P0DPA2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VSIG8P0DPA2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.27■□□□□ 0.68
VSIG8P0DPA2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VSIG8P0DPA2 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VSIG8P0DPA2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VSIG8P0DPA2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
VSIG8P0DPA2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.27■□□□□ 0.68
VSIG8P0DPA2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.27■□□□□ 0.68
VSIG8P0DPA2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
VSIG8P0DPA2 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.27■□□□□ 0.68
VSIG8P0DPA2 U85056.1-201ENST00000616429 682 ntBASIC19.27■□□□□ 0.68
VSIG8P0DPA2 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.27■□□□□ 0.67
VSIG8P0DPA2 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
VSIG8P0DPA2 AC127496.7-201ENST00000625110 1798 ntBASIC19.27■□□□□ 0.67
VSIG8P0DPA2 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VSIG8P0DPA2 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
VSIG8P0DPA2 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
VSIG8P0DPA2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VSIG8P0DPA2 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VSIG8P0DPA2 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VSIG8P0DPA2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
VSIG8P0DPA2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
VSIG8P0DPA2 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.26■□□□□ 0.67
VSIG8P0DPA2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VSIG8P0DPA2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
VSIG8P0DPA2 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.26■□□□□ 0.67
VSIG8P0DPA2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
VSIG8P0DPA2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.26■□□□□ 0.67
VSIG8P0DPA2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
VSIG8P0DPA2 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
VSIG8P0DPA2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.26■□□□□ 0.67
VSIG8P0DPA2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
VSIG8P0DPA2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
VSIG8P0DPA2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
VSIG8P0DPA2 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms