Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMIM17P0DL12 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SMIM17P0DL12 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SMIM17P0DL12 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.71■□□□□ 0.27
SMIM17P0DL12 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMIM17P0DL12 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMIM17P0DL12 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMIM17P0DL12 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMIM17P0DL12 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SMIM17P0DL12 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC16.7■□□□□ 0.26
SMIM17P0DL12 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM17P0DL12 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SMIM17P0DL12 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM17P0DL12 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM17P0DL12 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM17P0DL12 GALC-202ENST00000393568 2054 ntTSL 2 BASIC16.7■□□□□ 0.26
SMIM17P0DL12 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM17P0DL12 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM17P0DL12 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM17P0DL12 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM17P0DL12 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC16.7■□□□□ 0.26
SMIM17P0DL12 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SMIM17P0DL12 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM17P0DL12 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMIM17P0DL12 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.69■□□□□ 0.26
SMIM17P0DL12 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM17P0DL12 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM17P0DL12 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM17P0DL12 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM17P0DL12 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM17P0DL12 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM17P0DL12 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
SMIM17P0DL12 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.69■□□□□ 0.26
SMIM17P0DL12 AC022413.1-201ENST00000624602 984 ntBASIC16.69■□□□□ 0.26
SMIM17P0DL12 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.69■□□□□ 0.26
SMIM17P0DL12 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMIM17P0DL12 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM17P0DL12 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC16.68■□□□□ 0.26
SMIM17P0DL12 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM17P0DL12 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SMIM17P0DL12 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM17P0DL12 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM17P0DL12 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.68■□□□□ 0.26
SMIM17P0DL12 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMIM17P0DL12 AIRN-201ENST00000601203 4374 ntBASIC16.68■□□□□ 0.26
SMIM17P0DL12 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
SMIM17P0DL12 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
SMIM17P0DL12 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC16.68■□□□□ 0.26
SMIM17P0DL12 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC16.67■□□□□ 0.26
SMIM17P0DL12 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM17P0DL12 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
SMIM17P0DL12 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM17P0DL12 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
SMIM17P0DL12 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM17P0DL12 LINC00565-201ENST00000562710 2331 ntBASIC16.67■□□□□ 0.26
SMIM17P0DL12 STK25-234ENST00000535007 2459 ntTSL 2 BASIC16.67■□□□□ 0.26
SMIM17P0DL12 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SMIM17P0DL12 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SMIM17P0DL12 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.66■□□□□ 0.26
SMIM17P0DL12 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM17P0DL12 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM17P0DL12 AC233723.2-201ENST00000623798 2106 ntBASIC16.66■□□□□ 0.26
SMIM17P0DL12 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.66■□□□□ 0.26
SMIM17P0DL12 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SMIM17P0DL12 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM17P0DL12 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.66■□□□□ 0.26
SMIM17P0DL12 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM17P0DL12 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM17P0DL12 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SMIM17P0DL12 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.66■□□□□ 0.26
SMIM17P0DL12 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SMIM17P0DL12 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM17P0DL12 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM17P0DL12 EP400NL-214ENST00000641289 2402 ntBASIC16.65■□□□□ 0.26
SMIM17P0DL12 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM17P0DL12 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC16.65■□□□□ 0.26
SMIM17P0DL12 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.65■□□□□ 0.26
SMIM17P0DL12 AC007029.1-201ENST00000604183 313 ntBASIC16.65■□□□□ 0.26
SMIM17P0DL12 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM17P0DL12 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM17P0DL12 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SMIM17P0DL12 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM17P0DL12 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM17P0DL12 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM17P0DL12 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM17P0DL12 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SMIM17P0DL12 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SMIM17P0DL12 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC16.65■□□□□ 0.26
SMIM17P0DL12 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM17P0DL12 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM17P0DL12 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM17P0DL12 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM17P0DL12 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
SMIM17P0DL12 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM17P0DL12 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM17P0DL12 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM17P0DL12 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC16.64■□□□□ 0.25
SMIM17P0DL12 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
SMIM17P0DL12 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
SMIM17P0DL12 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms