Protein–RNA interactions for Protein: P0DKX4

SMIM18, Small integral membrane protein 18, humanhuman

Predictions only

Length 95 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM18P0DKX4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM18P0DKX4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
SMIM18P0DKX4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM18P0DKX4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM18P0DKX4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SMIM18P0DKX4 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
SMIM18P0DKX4 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM18P0DKX4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM18P0DKX4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM18P0DKX4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMIM18P0DKX4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SMIM18P0DKX4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM18P0DKX4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM18P0DKX4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SMIM18P0DKX4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM18P0DKX4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM18P0DKX4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.75■□□□□ 0.91
SMIM18P0DKX4 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SMIM18P0DKX4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SMIM18P0DKX4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM18P0DKX4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMIM18P0DKX4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.74■□□□□ 0.91
SMIM18P0DKX4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SMIM18P0DKX4 AC080038.3-201ENST00000623346 1952 ntBASIC20.74■□□□□ 0.91
SMIM18P0DKX4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.74■□□□□ 0.91
SMIM18P0DKX4 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM18P0DKX4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM18P0DKX4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM18P0DKX4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM18P0DKX4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.74■□□□□ 0.91
SMIM18P0DKX4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMIM18P0DKX4 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.74■□□□□ 0.91
SMIM18P0DKX4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM18P0DKX4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.73■□□□□ 0.91
SMIM18P0DKX4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM18P0DKX4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.73■□□□□ 0.91
SMIM18P0DKX4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.73■□□□□ 0.91
SMIM18P0DKX4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM18P0DKX4 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC20.73■□□□□ 0.91
SMIM18P0DKX4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM18P0DKX4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM18P0DKX4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMIM18P0DKX4 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM18P0DKX4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.72■□□□□ 0.91
SMIM18P0DKX4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM18P0DKX4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM18P0DKX4 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM18P0DKX4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.72■□□□□ 0.91
SMIM18P0DKX4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM18P0DKX4 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SMIM18P0DKX4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMIM18P0DKX4 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMIM18P0DKX4 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMIM18P0DKX4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMIM18P0DKX4 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SMIM18P0DKX4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC20.71■□□□□ 0.91
SMIM18P0DKX4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.71■□□□□ 0.91
SMIM18P0DKX4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SMIM18P0DKX4 AC079630.1-202ENST00000618127 1840 ntBASIC20.71■□□□□ 0.91
SMIM18P0DKX4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SMIM18P0DKX4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.91
SMIM18P0DKX4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC20.7■□□□□ 0.9
SMIM18P0DKX4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SMIM18P0DKX4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMIM18P0DKX4 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
SMIM18P0DKX4 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SMIM18P0DKX4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SMIM18P0DKX4 FAM99A-202ENST00000538190 1989 ntBASIC20.7■□□□□ 0.9
SMIM18P0DKX4 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.69■□□□□ 0.9
SMIM18P0DKX4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMIM18P0DKX4 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SMIM18P0DKX4 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMIM18P0DKX4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.69■□□□□ 0.9
SMIM18P0DKX4 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMIM18P0DKX4 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMIM18P0DKX4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SMIM18P0DKX4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SMIM18P0DKX4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SMIM18P0DKX4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.68■□□□□ 0.9
SMIM18P0DKX4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMIM18P0DKX4 MIR219A2-201ENST00000608502 1504 ntBASIC20.68■□□□□ 0.9
SMIM18P0DKX4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.68■□□□□ 0.9
SMIM18P0DKX4 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMIM18P0DKX4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SMIM18P0DKX4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.67■□□□□ 0.9
SMIM18P0DKX4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMIM18P0DKX4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SMIM18P0DKX4 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SMIM18P0DKX4 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMIM18P0DKX4 AL161729.1-201ENST00000604104 1402 ntBASIC20.67■□□□□ 0.9
SMIM18P0DKX4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMIM18P0DKX4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
SMIM18P0DKX4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SMIM18P0DKX4 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SMIM18P0DKX4 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SMIM18P0DKX4 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SMIM18P0DKX4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SMIM18P0DKX4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.66■□□□□ 0.9
SMIM18P0DKX4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SMIM18P0DKX4 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms