Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBCP0CG48 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBCP0CG48 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBCP0CG48 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBCP0CG48 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
UBCP0CG48 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBCP0CG48 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.74■□□□□ 0.75
UBCP0CG48 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
UBCP0CG48 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
UBCP0CG48 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
UBCP0CG48 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
UBCP0CG48 AC233723.2-201ENST00000623798 2106 ntBASIC19.73■□□□□ 0.75
UBCP0CG48 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBCP0CG48 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
UBCP0CG48 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
UBCP0CG48 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.73■□□□□ 0.75
UBCP0CG48 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBCP0CG48 ABHD17AP5-201ENST00000580133 923 ntBASIC19.73■□□□□ 0.75
UBCP0CG48 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBCP0CG48 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBCP0CG48 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBCP0CG48 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
UBCP0CG48 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
UBCP0CG48 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBCP0CG48 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBCP0CG48 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
UBCP0CG48 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.72■□□□□ 0.75
UBCP0CG48 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.72■□□□□ 0.75
UBCP0CG48 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.72■□□□□ 0.75
UBCP0CG48 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBCP0CG48 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.72■□□□□ 0.75
UBCP0CG48 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBCP0CG48 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBCP0CG48 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBCP0CG48 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
UBCP0CG48 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
UBCP0CG48 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBCP0CG48 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBCP0CG48 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
UBCP0CG48 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBCP0CG48 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC19.71■□□□□ 0.75
UBCP0CG48 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.71■□□□□ 0.75
UBCP0CG48 NTF6A-201ENST00000591175 560 ntBASIC19.71■□□□□ 0.75
UBCP0CG48 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
UBCP0CG48 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.71■□□□□ 0.75
UBCP0CG48 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.71■□□□□ 0.75
UBCP0CG48 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
UBCP0CG48 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
UBCP0CG48 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
UBCP0CG48 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBCP0CG48 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC19.7■□□□□ 0.74
UBCP0CG48 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBCP0CG48 DUX4L18-201ENST00000553347 1267 ntBASIC19.7■□□□□ 0.74
UBCP0CG48 AC120024.1-201ENST00000562672 995 ntBASIC19.7■□□□□ 0.74
UBCP0CG48 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.7■□□□□ 0.74
UBCP0CG48 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBCP0CG48 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC19.7■□□□□ 0.74
UBCP0CG48 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.7■□□□□ 0.74
UBCP0CG48 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBCP0CG48 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBCP0CG48 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBCP0CG48 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBCP0CG48 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
UBCP0CG48 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
UBCP0CG48 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
UBCP0CG48 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBCP0CG48 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBCP0CG48 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBCP0CG48 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
UBCP0CG48 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
UBCP0CG48 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBCP0CG48 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.69■□□□□ 0.74
UBCP0CG48 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
UBCP0CG48 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBCP0CG48 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBCP0CG48 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
UBCP0CG48 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBCP0CG48 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
UBCP0CG48 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC19.68■□□□□ 0.74
UBCP0CG48 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.68■□□□□ 0.74
UBCP0CG48 BHLHE23-202ENST00000612929 1109 ntBASIC19.68■□□□□ 0.74
UBCP0CG48 BRD4-212ENST00000630599 726 ntTSL 2 BASIC19.68■□□□□ 0.74
UBCP0CG48 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBCP0CG48 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
UBCP0CG48 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
UBCP0CG48 C1orf229-201ENST00000623686 2258 ntBASIC19.68■□□□□ 0.74
UBCP0CG48 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBCP0CG48 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBCP0CG48 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBCP0CG48 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
UBCP0CG48 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.67■□□□□ 0.74
UBCP0CG48 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBCP0CG48 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBCP0CG48 AC074183.2-201ENST00000623112 922 ntBASIC19.67■□□□□ 0.74
UBCP0CG48 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
UBCP0CG48 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBCP0CG48 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBCP0CG48 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBCP0CG48 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
UBCP0CG48 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms