Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
P04436 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
P04436 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
P04436 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
P04436 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
P04436 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
P04436 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
P04436 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.66■□□□□ 0.9
P04436 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.66■□□□□ 0.9
P04436 AC106739.1-201ENST00000617035 715 ntBASIC20.66■□□□□ 0.9
P04436 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
P04436 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
P04436 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
P04436 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.66■□□□□ 0.9
P04436 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
P04436 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
P04436 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
P04436 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.65■□□□□ 0.9
P04436 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
P04436 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.65■□□□□ 0.9
P04436 AC135279.3-201ENST00000610945 1311 ntBASIC20.65■□□□□ 0.9
P04436 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
P04436 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
P04436 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
P04436 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
P04436 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
P04436 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
P04436 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
P04436 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.64■□□□□ 0.89
P04436 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
P04436 AC133561.4-201ENST00000566112 224 ntBASIC20.64■□□□□ 0.89
P04436 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.64■□□□□ 0.89
P04436 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.64■□□□□ 0.89
P04436 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
P04436 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.64■□□□□ 0.89
P04436 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.63■□□□□ 0.89
P04436 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P04436 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P04436 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P04436 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
P04436 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P04436 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
P04436 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
P04436 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
P04436 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.62■□□□□ 0.89
P04436 AC009086.3-201ENST00000623486 1008 ntBASIC20.62■□□□□ 0.89
P04436 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
P04436 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
P04436 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
P04436 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
P04436 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.61■□□□□ 0.89
P04436 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.61■□□□□ 0.89
P04436 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.61■□□□□ 0.89
P04436 AC024257.2-201ENST00000549699 147 ntBASIC20.61■□□□□ 0.89
P04436 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.61■□□□□ 0.89
P04436 AC005837.3-201ENST00000612163 286 ntBASIC20.61■□□□□ 0.89
P04436 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.61■□□□□ 0.89
P04436 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
P04436 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
P04436 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
P04436 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
P04436 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.6■□□□□ 0.89
P04436 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P04436 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P04436 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P04436 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P04436 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
P04436 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.6■□□□□ 0.89
P04436 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
P04436 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
P04436 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P04436 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P04436 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
P04436 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
P04436 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
P04436 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.59■□□□□ 0.89
P04436 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
P04436 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.59■□□□□ 0.89
P04436 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P04436 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P04436 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
P04436 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P04436 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
P04436 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
P04436 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
P04436 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
P04436 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
P04436 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
P04436 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
P04436 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
P04436 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
P04436 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
P04436 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
P04436 SERBP1P1-201ENST00000396021 1160 ntBASIC20.58■□□□□ 0.89
P04436 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.58■□□□□ 0.89
P04436 AL138724.1-201ENST00000606771 1088 ntBASIC20.58■□□□□ 0.89
P04436 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
P04436 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
P04436 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
P04436 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms