Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.82■■□□□ 1.56
CHRNA1P02708 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.82■■□□□ 1.56
CHRNA1P02708 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
CHRNA1P02708 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC24.82■■□□□ 1.56
CHRNA1P02708 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC24.81■■□□□ 1.56
CHRNA1P02708 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.81■■□□□ 1.56
CHRNA1P02708 AL162430.1-201ENST00000480705 870 ntBASIC24.81■■□□□ 1.56
CHRNA1P02708 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC24.81■■□□□ 1.56
CHRNA1P02708 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.81■■□□□ 1.56
CHRNA1P02708 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24.81■■□□□ 1.56
CHRNA1P02708 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
CHRNA1P02708 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
CHRNA1P02708 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.8■■□□□ 1.56
CHRNA1P02708 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CHRNA1P02708 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
CHRNA1P02708 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.8■■□□□ 1.56
CHRNA1P02708 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.8■■□□□ 1.56
CHRNA1P02708 TMEM202-AS1-202ENST00000565181 2325 ntBASIC24.8■■□□□ 1.56
CHRNA1P02708 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
CHRNA1P02708 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
CHRNA1P02708 AC141586.4-201ENST00000624558 1573 ntBASIC24.8■■□□□ 1.56
CHRNA1P02708 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.79■■□□□ 1.56
CHRNA1P02708 PARL-206ENST00000435888 1098 ntTSL 5 BASIC24.79■■□□□ 1.56
CHRNA1P02708 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC24.79■■□□□ 1.56
CHRNA1P02708 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
CHRNA1P02708 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
CHRNA1P02708 AP003733.4-201ENST00000623785 1697 ntBASIC24.78■■□□□ 1.56
CHRNA1P02708 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.78■■□□□ 1.56
CHRNA1P02708 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC24.78■■□□□ 1.56
CHRNA1P02708 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CHRNA1P02708 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
CHRNA1P02708 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
CHRNA1P02708 ASB1-202ENST00000409297 878 ntTSL 5 BASIC24.78■■□□□ 1.56
CHRNA1P02708 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC24.78■■□□□ 1.56
CHRNA1P02708 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CHRNA1P02708 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
CHRNA1P02708 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.78■■□□□ 1.56
CHRNA1P02708 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHRNA1P02708 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24.77■■□□□ 1.56
CHRNA1P02708 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC24.77■■□□□ 1.56
CHRNA1P02708 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHRNA1P02708 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHRNA1P02708 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHRNA1P02708 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
CHRNA1P02708 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
CHRNA1P02708 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.76■■□□□ 1.55
CHRNA1P02708 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.76■■□□□ 1.55
CHRNA1P02708 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHRNA1P02708 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.75■■□□□ 1.55
CHRNA1P02708 SLC47A1P1-202ENST00000449666 945 ntBASIC24.75■■□□□ 1.55
CHRNA1P02708 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
CHRNA1P02708 AC126544.1-201ENST00000580842 1059 ntBASIC24.75■■□□□ 1.55
CHRNA1P02708 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.75■■□□□ 1.55
CHRNA1P02708 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.75■■□□□ 1.55
CHRNA1P02708 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC24.75■■□□□ 1.55
CHRNA1P02708 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHRNA1P02708 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.75■■□□□ 1.55
CHRNA1P02708 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC24.75■■□□□ 1.55
CHRNA1P02708 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
CHRNA1P02708 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC24.75■■□□□ 1.55
CHRNA1P02708 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CHRNA1P02708 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
CHRNA1P02708 SHF-207ENST00000560540 2062 ntTSL 5 BASIC24.74■■□□□ 1.55
CHRNA1P02708 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHRNA1P02708 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHRNA1P02708 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
CHRNA1P02708 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
CHRNA1P02708 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHRNA1P02708 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHRNA1P02708 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.73■■□□□ 1.55
CHRNA1P02708 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC24.73■■□□□ 1.55
CHRNA1P02708 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
CHRNA1P02708 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHRNA1P02708 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHRNA1P02708 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.73■■□□□ 1.55
CHRNA1P02708 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHRNA1P02708 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
CHRNA1P02708 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHRNA1P02708 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
CHRNA1P02708 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CHRNA1P02708 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CHRNA1P02708 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHRNA1P02708 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
CHRNA1P02708 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.72■■□□□ 1.55
CHRNA1P02708 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
CHRNA1P02708 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.71■■□□□ 1.55
CHRNA1P02708 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
CHRNA1P02708 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC24.71■■□□□ 1.55
CHRNA1P02708 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
CHRNA1P02708 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
CHRNA1P02708 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.71■■□□□ 1.55
CHRNA1P02708 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.71■■□□□ 1.55
CHRNA1P02708 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
CHRNA1P02708 TSPY26P-201ENST00000476365 1326 ntBASIC24.7■■□□□ 1.54
CHRNA1P02708 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC24.7■■□□□ 1.54
CHRNA1P02708 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CHRNA1P02708 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.7■■□□□ 1.54
CHRNA1P02708 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC24.7■■□□□ 1.54
CHRNA1P02708 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
CHRNA1P02708 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.7■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms