Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTN3O95197 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
RTN3O95197 C17orf82-201ENST00000623772 1530 ntBASIC23.8■■□□□ 1.4
RTN3O95197 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
RTN3O95197 LINC00543-201ENST00000567234 1845 ntBASIC23.8■■□□□ 1.4
RTN3O95197 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTN3O95197 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.8■■□□□ 1.4
RTN3O95197 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RTN3O95197 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
RTN3O95197 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
RTN3O95197 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
RTN3O95197 MIR638-201ENST00000385237 100 ntBASIC23.79■■□□□ 1.4
RTN3O95197 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.79■■□□□ 1.4
RTN3O95197 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.79■■□□□ 1.4
RTN3O95197 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RTN3O95197 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTN3O95197 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.78■■□□□ 1.4
RTN3O95197 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RTN3O95197 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
RTN3O95197 UNC93B3-201ENST00000308076 687 ntBASIC23.78■■□□□ 1.4
RTN3O95197 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.78■■□□□ 1.4
RTN3O95197 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RTN3O95197 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTN3O95197 AL139125.2-201ENST00000623134 1869 ntBASIC23.78■■□□□ 1.4
RTN3O95197 LINC01124-201ENST00000409786 2117 ntBASIC23.78■■□□□ 1.4
RTN3O95197 AC019069.1-201ENST00000610008 1333 ntBASIC23.78■■□□□ 1.4
RTN3O95197 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RTN3O95197 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RTN3O95197 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
RTN3O95197 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RTN3O95197 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
RTN3O95197 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RTN3O95197 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RTN3O95197 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
RTN3O95197 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
RTN3O95197 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.76■■□□□ 1.39
RTN3O95197 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
RTN3O95197 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RTN3O95197 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
RTN3O95197 AC133561.4-201ENST00000566112 224 ntBASIC23.76■■□□□ 1.39
RTN3O95197 AC241377.3-202ENST00000626088 1088 ntBASIC23.76■■□□□ 1.39
RTN3O95197 AC241585.3-202ENST00000628937 1088 ntBASIC23.76■■□□□ 1.39
RTN3O95197 AC245100.8-202ENST00000629247 1058 ntBASIC23.76■■□□□ 1.39
RTN3O95197 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.76■■□□□ 1.39
RTN3O95197 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.76■■□□□ 1.39
RTN3O95197 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTN3O95197 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
RTN3O95197 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.76■■□□□ 1.39
RTN3O95197 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RTN3O95197 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTN3O95197 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RTN3O95197 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RTN3O95197 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTN3O95197 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTN3O95197 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTN3O95197 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
RTN3O95197 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC23.75■■□□□ 1.39
RTN3O95197 AC106739.1-201ENST00000617035 715 ntBASIC23.75■■□□□ 1.39
RTN3O95197 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.75■■□□□ 1.39
RTN3O95197 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.75■■□□□ 1.39
RTN3O95197 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
RTN3O95197 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.75■■□□□ 1.39
RTN3O95197 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTN3O95197 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
RTN3O95197 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
RTN3O95197 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.74■■□□□ 1.39
RTN3O95197 PBX2P1-201ENST00000493219 1291 ntBASIC23.74■■□□□ 1.39
RTN3O95197 AC099791.2-201ENST00000605725 427 ntBASIC23.74■■□□□ 1.39
RTN3O95197 AL136162.1-201ENST00000607711 1078 ntBASIC23.74■■□□□ 1.39
RTN3O95197 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
RTN3O95197 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
RTN3O95197 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
RTN3O95197 SYT6-210ENST00000641643 1587 ntBASIC23.74■■□□□ 1.39
RTN3O95197 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTN3O95197 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTN3O95197 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
RTN3O95197 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTN3O95197 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
RTN3O95197 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.73■■□□□ 1.39
RTN3O95197 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTN3O95197 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.73■■□□□ 1.39
RTN3O95197 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.73■■□□□ 1.39
RTN3O95197 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
RTN3O95197 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTN3O95197 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RTN3O95197 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
RTN3O95197 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.72■■□□□ 1.39
RTN3O95197 AC135279.3-201ENST00000610945 1311 ntBASIC23.72■■□□□ 1.39
RTN3O95197 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RTN3O95197 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
RTN3O95197 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC23.72■■□□□ 1.39
RTN3O95197 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
RTN3O95197 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTN3O95197 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTN3O95197 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.71■■□□□ 1.39
RTN3O95197 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.71■■□□□ 1.39
RTN3O95197 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
RTN3O95197 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.71■■□□□ 1.39
RTN3O95197 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RTN3O95197 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms