Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.36■□□□□ 0.53
SCAF4O95104 U85056.1-201ENST00000616429 682 ntBASIC18.36■□□□□ 0.53
SCAF4O95104 AC133552.2-201ENST00000619106 1032 ntBASIC18.36■□□□□ 0.53
SCAF4O95104 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
SCAF4O95104 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.36■□□□□ 0.53
SCAF4O95104 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCAF4O95104 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCAF4O95104 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.36■□□□□ 0.53
SCAF4O95104 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCAF4O95104 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCAF4O95104 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCAF4O95104 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCAF4O95104 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCAF4O95104 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCAF4O95104 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCAF4O95104 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCAF4O95104 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCAF4O95104 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCAF4O95104 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
SCAF4O95104 LINC00526-201ENST00000581067 1875 ntBASIC18.35■□□□□ 0.53
SCAF4O95104 AC127496.7-201ENST00000625110 1798 ntBASIC18.35■□□□□ 0.53
SCAF4O95104 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCAF4O95104 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.34■□□□□ 0.53
SCAF4O95104 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCAF4O95104 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
SCAF4O95104 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCAF4O95104 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.34■□□□□ 0.53
SCAF4O95104 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCAF4O95104 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCAF4O95104 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCAF4O95104 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.34■□□□□ 0.53
SCAF4O95104 NTF6A-201ENST00000591175 560 ntBASIC18.34■□□□□ 0.53
SCAF4O95104 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCAF4O95104 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCAF4O95104 AC009831.1-201ENST00000580420 1582 ntBASIC18.34■□□□□ 0.53
SCAF4O95104 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SCAF4O95104 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
SCAF4O95104 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SCAF4O95104 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SCAF4O95104 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
SCAF4O95104 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCAF4O95104 DUSP8P3-201ENST00000399571 1760 ntBASIC18.33■□□□□ 0.53
SCAF4O95104 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCAF4O95104 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SCAF4O95104 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.33■□□□□ 0.52
SCAF4O95104 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.33■□□□□ 0.52
SCAF4O95104 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC18.33■□□□□ 0.52
SCAF4O95104 AC026202.3-201ENST00000600805 1127 ntBASIC18.33■□□□□ 0.52
SCAF4O95104 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCAF4O95104 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.33■□□□□ 0.52
SCAF4O95104 ANOS2P-203ENST00000472227 1816 ntBASIC18.33■□□□□ 0.52
SCAF4O95104 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCAF4O95104 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCAF4O95104 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCAF4O95104 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCAF4O95104 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCAF4O95104 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.32■□□□□ 0.52
SCAF4O95104 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.32■□□□□ 0.52
SCAF4O95104 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCAF4O95104 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
SCAF4O95104 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCAF4O95104 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCAF4O95104 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCAF4O95104 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCAF4O95104 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
SCAF4O95104 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCAF4O95104 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SCAF4O95104 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCAF4O95104 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCAF4O95104 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCAF4O95104 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SCAF4O95104 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCAF4O95104 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCAF4O95104 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.31■□□□□ 0.52
SCAF4O95104 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SCAF4O95104 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SCAF4O95104 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCAF4O95104 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCAF4O95104 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
SCAF4O95104 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.3■□□□□ 0.52
SCAF4O95104 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.3■□□□□ 0.52
SCAF4O95104 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCAF4O95104 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
SCAF4O95104 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCAF4O95104 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SCAF4O95104 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCAF4O95104 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.3■□□□□ 0.52
SCAF4O95104 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCAF4O95104 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SCAF4O95104 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.3■□□□□ 0.52
SCAF4O95104 AC007375.3-201ENST00000600936 2314 ntBASIC18.29■□□□□ 0.52
SCAF4O95104 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCAF4O95104 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCAF4O95104 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCAF4O95104 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SCAF4O95104 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCAF4O95104 AL592293.1-201ENST00000502889 1188 ntBASIC18.29■□□□□ 0.52
SCAF4O95104 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SCAF4O95104 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SCAF4O95104 RAP2CP1-202ENST00000605179 643 ntBASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms