Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
RFPL1O75677 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC22.7■■□□□ 1.22
RFPL1O75677 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
RFPL1O75677 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
RFPL1O75677 AL022069.1-201ENST00000568025 1636 ntBASIC22.7■■□□□ 1.22
RFPL1O75677 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
RFPL1O75677 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RFPL1O75677 CLDN5-201ENST00000403084 2357 ntBASIC22.69■■□□□ 1.22
RFPL1O75677 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RFPL1O75677 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC22.69■■□□□ 1.22
RFPL1O75677 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RFPL1O75677 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
RFPL1O75677 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RFPL1O75677 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.69■■□□□ 1.22
RFPL1O75677 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
RFPL1O75677 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
RFPL1O75677 MTURN-203ENST00000409688 843 ntTSL 2 BASIC22.69■■□□□ 1.22
RFPL1O75677 LONRF2P2-201ENST00000439212 571 ntBASIC22.69■■□□□ 1.22
RFPL1O75677 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.69■■□□□ 1.22
RFPL1O75677 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.69■■□□□ 1.22
RFPL1O75677 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
RFPL1O75677 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
RFPL1O75677 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
RFPL1O75677 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RFPL1O75677 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
RFPL1O75677 AC019069.1-201ENST00000610008 1333 ntBASIC22.68■■□□□ 1.22
RFPL1O75677 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC22.68■■□□□ 1.22
RFPL1O75677 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
RFPL1O75677 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RFPL1O75677 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
RFPL1O75677 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RFPL1O75677 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RFPL1O75677 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RFPL1O75677 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RFPL1O75677 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.67■■□□□ 1.22
RFPL1O75677 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RFPL1O75677 EI24-204ENST00000527235 1625 ntTSL 5 BASIC22.67■■□□□ 1.22
RFPL1O75677 TERT-206ENST00000508104 2486 ntTSL 5 BASIC22.67■■□□□ 1.22
RFPL1O75677 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.67■■□□□ 1.22
RFPL1O75677 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RFPL1O75677 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RFPL1O75677 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC22.66■■□□□ 1.22
RFPL1O75677 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RFPL1O75677 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RFPL1O75677 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RFPL1O75677 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
RFPL1O75677 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RFPL1O75677 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.66■■□□□ 1.22
RFPL1O75677 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RFPL1O75677 AC131274.2-201ENST00000580697 1507 ntBASIC22.66■■□□□ 1.22
RFPL1O75677 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RFPL1O75677 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC22.66■■□□□ 1.22
RFPL1O75677 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RFPL1O75677 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RFPL1O75677 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RFPL1O75677 AC019171.1-201ENST00000601251 1056 ntBASIC22.65■■□□□ 1.22
RFPL1O75677 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RFPL1O75677 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RFPL1O75677 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RFPL1O75677 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC22.65■■□□□ 1.22
RFPL1O75677 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RFPL1O75677 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
RFPL1O75677 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
RFPL1O75677 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RFPL1O75677 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.64■■□□□ 1.21
RFPL1O75677 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RFPL1O75677 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.64■■□□□ 1.21
RFPL1O75677 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
RFPL1O75677 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
RFPL1O75677 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC22.64■■□□□ 1.21
RFPL1O75677 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC22.63■■□□□ 1.21
RFPL1O75677 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RFPL1O75677 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
RFPL1O75677 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RFPL1O75677 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RFPL1O75677 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RFPL1O75677 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.63■■□□□ 1.21
RFPL1O75677 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
RFPL1O75677 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
RFPL1O75677 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
RFPL1O75677 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
RFPL1O75677 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RFPL1O75677 ALDH1A3-203ENST00000557963 1670 ntBASIC22.62■■□□□ 1.21
RFPL1O75677 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RFPL1O75677 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RFPL1O75677 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC22.62■■□□□ 1.21
RFPL1O75677 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
RFPL1O75677 AL356441.2-201ENST00000443009 864 ntBASIC22.62■■□□□ 1.21
RFPL1O75677 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC22.62■■□□□ 1.21
RFPL1O75677 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.62■■□□□ 1.21
RFPL1O75677 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.62■■□□□ 1.21
RFPL1O75677 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RFPL1O75677 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC22.61■■□□□ 1.21
RFPL1O75677 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.61■■□□□ 1.21
RFPL1O75677 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RFPL1O75677 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RFPL1O75677 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
RFPL1O75677 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC22.61■■□□□ 1.21
RFPL1O75677 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
RFPL1O75677 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms