Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.49■■□□□ 1.19
NDUFS3O75489 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
NDUFS3O75489 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NDUFS3O75489 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.49■■□□□ 1.19
NDUFS3O75489 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC22.48■■□□□ 1.19
NDUFS3O75489 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NDUFS3O75489 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NDUFS3O75489 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
NDUFS3O75489 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.48■■□□□ 1.19
NDUFS3O75489 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC22.48■■□□□ 1.19
NDUFS3O75489 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
NDUFS3O75489 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.48■■□□□ 1.19
NDUFS3O75489 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
NDUFS3O75489 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
NDUFS3O75489 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.48■■□□□ 1.19
NDUFS3O75489 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NDUFS3O75489 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.48■■□□□ 1.19
NDUFS3O75489 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
NDUFS3O75489 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NDUFS3O75489 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NDUFS3O75489 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NDUFS3O75489 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
NDUFS3O75489 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
NDUFS3O75489 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NDUFS3O75489 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.47■■□□□ 1.19
NDUFS3O75489 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
NDUFS3O75489 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC22.47■■□□□ 1.19
NDUFS3O75489 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.47■■□□□ 1.19
NDUFS3O75489 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
NDUFS3O75489 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NDUFS3O75489 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NDUFS3O75489 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
NDUFS3O75489 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NDUFS3O75489 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
NDUFS3O75489 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
NDUFS3O75489 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NDUFS3O75489 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
NDUFS3O75489 AC092068.2-201ENST00000590491 1708 ntBASIC22.45■■□□□ 1.19
NDUFS3O75489 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
NDUFS3O75489 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
NDUFS3O75489 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC22.45■■□□□ 1.18
NDUFS3O75489 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
NDUFS3O75489 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
NDUFS3O75489 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
NDUFS3O75489 AC005703.6-201ENST00000623265 1329 ntBASIC22.45■■□□□ 1.18
NDUFS3O75489 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NDUFS3O75489 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
NDUFS3O75489 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.45■■□□□ 1.18
NDUFS3O75489 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NDUFS3O75489 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
NDUFS3O75489 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
NDUFS3O75489 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
NDUFS3O75489 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NDUFS3O75489 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NDUFS3O75489 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.44■■□□□ 1.18
NDUFS3O75489 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
NDUFS3O75489 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
NDUFS3O75489 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
NDUFS3O75489 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NDUFS3O75489 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.44■■□□□ 1.18
NDUFS3O75489 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
NDUFS3O75489 MTDHP2-201ENST00000601468 714 ntBASIC22.44■■□□□ 1.18
NDUFS3O75489 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.44■■□□□ 1.18
NDUFS3O75489 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NDUFS3O75489 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
NDUFS3O75489 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC22.43■■□□□ 1.18
NDUFS3O75489 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
NDUFS3O75489 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NDUFS3O75489 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NDUFS3O75489 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC22.43■■□□□ 1.18
NDUFS3O75489 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NDUFS3O75489 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
NDUFS3O75489 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NDUFS3O75489 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NDUFS3O75489 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
NDUFS3O75489 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NDUFS3O75489 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC22.43■■□□□ 1.18
NDUFS3O75489 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
NDUFS3O75489 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NDUFS3O75489 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
NDUFS3O75489 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
NDUFS3O75489 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.42■■□□□ 1.18
NDUFS3O75489 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.42■■□□□ 1.18
NDUFS3O75489 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC22.42■■□□□ 1.18
NDUFS3O75489 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
NDUFS3O75489 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC22.42■■□□□ 1.18
NDUFS3O75489 TSPY9P-201ENST00000440215 945 ntBASIC22.42■■□□□ 1.18
NDUFS3O75489 TSPY11P-201ENST00000442607 1045 ntBASIC22.42■■□□□ 1.18
NDUFS3O75489 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.42■■□□□ 1.18
NDUFS3O75489 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
NDUFS3O75489 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
NDUFS3O75489 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
NDUFS3O75489 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
NDUFS3O75489 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
NDUFS3O75489 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
NDUFS3O75489 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.41■■□□□ 1.18
NDUFS3O75489 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NDUFS3O75489 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
NDUFS3O75489 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
NDUFS3O75489 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms