Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF253O75346 C1orf229-201ENST00000623686 2258 ntBASIC17.47■□□□□ 0.39
ZNF253O75346 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF253O75346 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF253O75346 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF253O75346 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF253O75346 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF253O75346 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ZNF253O75346 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF253O75346 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF253O75346 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.46■□□□□ 0.39
ZNF253O75346 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF253O75346 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF253O75346 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF253O75346 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ZNF253O75346 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF253O75346 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
ZNF253O75346 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF253O75346 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
ZNF253O75346 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF253O75346 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
ZNF253O75346 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF253O75346 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF253O75346 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
ZNF253O75346 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF253O75346 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNF253O75346 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF253O75346 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF253O75346 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF253O75346 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
ZNF253O75346 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF253O75346 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
ZNF253O75346 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF253O75346 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF253O75346 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
ZNF253O75346 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
ZNF253O75346 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF253O75346 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF253O75346 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF253O75346 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ZNF253O75346 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.44■□□□□ 0.38
ZNF253O75346 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF253O75346 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC17.44■□□□□ 0.38
ZNF253O75346 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF253O75346 RNF126P1-201ENST00000567452 1320 ntBASIC17.44■□□□□ 0.38
ZNF253O75346 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.44■□□□□ 0.38
ZNF253O75346 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF253O75346 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF253O75346 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
ZNF253O75346 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF253O75346 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF253O75346 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF253O75346 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF253O75346 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF253O75346 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.43■□□□□ 0.38
ZNF253O75346 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF253O75346 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF253O75346 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ZNF253O75346 IDNK-203ENST00000405990 629 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF253O75346 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
ZNF253O75346 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC17.43■□□□□ 0.38
ZNF253O75346 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC17.43■□□□□ 0.38
ZNF253O75346 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ZNF253O75346 AC087393.1-201ENST00000582896 145 ntBASIC17.43■□□□□ 0.38
ZNF253O75346 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF253O75346 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.43■□□□□ 0.38
ZNF253O75346 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF253O75346 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ZNF253O75346 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
ZNF253O75346 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF253O75346 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF253O75346 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
ZNF253O75346 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF253O75346 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF253O75346 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.42■□□□□ 0.38
ZNF253O75346 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF253O75346 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.42■□□□□ 0.38
ZNF253O75346 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF253O75346 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF253O75346 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
ZNF253O75346 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC17.42■□□□□ 0.38
ZNF253O75346 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF253O75346 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF253O75346 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF253O75346 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF253O75346 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF253O75346 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
ZNF253O75346 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF253O75346 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF253O75346 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF253O75346 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF253O75346 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF253O75346 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ZNF253O75346 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF253O75346 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.41■□□□□ 0.38
ZNF253O75346 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
ZNF253O75346 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ZNF253O75346 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
ZNF253O75346 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.4■□□□□ 0.38
ZNF253O75346 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 421 ms