Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SH2D1AO60880 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
SH2D1AO60880 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SH2D1AO60880 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.87■□□□□ 0.29
SH2D1AO60880 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.87■□□□□ 0.29
SH2D1AO60880 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.87■□□□□ 0.29
SH2D1AO60880 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SH2D1AO60880 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SH2D1AO60880 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
SH2D1AO60880 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SH2D1AO60880 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SH2D1AO60880 AL022069.1-201ENST00000568025 1636 ntBASIC16.86■□□□□ 0.29
SH2D1AO60880 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC16.86■□□□□ 0.29
SH2D1AO60880 RPS2P7-201ENST00000447334 885 ntBASIC16.86■□□□□ 0.29
SH2D1AO60880 SSSCA1-AS1-201ENST00000567594 614 ntBASIC16.86■□□□□ 0.29
SH2D1AO60880 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SH2D1AO60880 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SH2D1AO60880 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SH2D1AO60880 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.86■□□□□ 0.29
SH2D1AO60880 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SH2D1AO60880 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
SH2D1AO60880 AC137767.1-201ENST00000602918 1920 ntBASIC16.86■□□□□ 0.29
SH2D1AO60880 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SH2D1AO60880 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SH2D1AO60880 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SH2D1AO60880 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC16.86■□□□□ 0.29
SH2D1AO60880 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
SH2D1AO60880 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SH2D1AO60880 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
SH2D1AO60880 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SH2D1AO60880 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SH2D1AO60880 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SH2D1AO60880 MIR639-201ENST00000384974 98 ntBASIC16.85■□□□□ 0.29
SH2D1AO60880 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SH2D1AO60880 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SH2D1AO60880 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SH2D1AO60880 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SH2D1AO60880 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SH2D1AO60880 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SH2D1AO60880 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SH2D1AO60880 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
SH2D1AO60880 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.84■□□□□ 0.29
SH2D1AO60880 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SH2D1AO60880 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SH2D1AO60880 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC16.84■□□□□ 0.29
SH2D1AO60880 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SH2D1AO60880 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SH2D1AO60880 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SH2D1AO60880 AL592295.1-201ENST00000400984 884 ntBASIC16.84■□□□□ 0.29
SH2D1AO60880 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.84■□□□□ 0.29
SH2D1AO60880 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC16.84■□□□□ 0.29
SH2D1AO60880 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.84■□□□□ 0.29
SH2D1AO60880 AC009831.1-201ENST00000580420 1582 ntBASIC16.84■□□□□ 0.29
SH2D1AO60880 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SH2D1AO60880 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.84■□□□□ 0.29
SH2D1AO60880 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.83■□□□□ 0.29
SH2D1AO60880 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SH2D1AO60880 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SH2D1AO60880 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SH2D1AO60880 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SH2D1AO60880 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC16.83■□□□□ 0.28
SH2D1AO60880 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SH2D1AO60880 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
SH2D1AO60880 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SH2D1AO60880 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SH2D1AO60880 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.83■□□□□ 0.28
SH2D1AO60880 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SH2D1AO60880 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SH2D1AO60880 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SH2D1AO60880 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SH2D1AO60880 WWC2-AS2-201ENST00000578387 2183 ntBASIC16.82■□□□□ 0.28
SH2D1AO60880 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.82■□□□□ 0.28
SH2D1AO60880 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
SH2D1AO60880 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.82■□□□□ 0.28
SH2D1AO60880 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SH2D1AO60880 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.82■□□□□ 0.28
SH2D1AO60880 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SH2D1AO60880 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SH2D1AO60880 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SH2D1AO60880 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.82■□□□□ 0.28
SH2D1AO60880 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SH2D1AO60880 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC16.82■□□□□ 0.28
SH2D1AO60880 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SH2D1AO60880 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SH2D1AO60880 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SH2D1AO60880 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SH2D1AO60880 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SH2D1AO60880 AC133552.2-201ENST00000619106 1032 ntBASIC16.81■□□□□ 0.28
SH2D1AO60880 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SH2D1AO60880 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SH2D1AO60880 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SH2D1AO60880 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SH2D1AO60880 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SH2D1AO60880 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SH2D1AO60880 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SH2D1AO60880 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SH2D1AO60880 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SH2D1AO60880 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SH2D1AO60880 AC242852.2-201ENST00000615738 1807 ntBASIC16.8■□□□□ 0.28
SH2D1AO60880 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms