Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PLOD3O60568 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.21■□□□□ 0.99
PLOD3O60568 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PLOD3O60568 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PLOD3O60568 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.21■□□□□ 0.99
PLOD3O60568 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PLOD3O60568 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
PLOD3O60568 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PLOD3O60568 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PLOD3O60568 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PLOD3O60568 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.2■□□□□ 0.98
PLOD3O60568 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PLOD3O60568 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
PLOD3O60568 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
PLOD3O60568 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PLOD3O60568 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
PLOD3O60568 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PLOD3O60568 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PLOD3O60568 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PLOD3O60568 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PLOD3O60568 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.19■□□□□ 0.98
PLOD3O60568 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.19■□□□□ 0.98
PLOD3O60568 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PLOD3O60568 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PLOD3O60568 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PLOD3O60568 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.19■□□□□ 0.98
PLOD3O60568 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PLOD3O60568 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
PLOD3O60568 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PLOD3O60568 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PLOD3O60568 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
PLOD3O60568 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
PLOD3O60568 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PLOD3O60568 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
PLOD3O60568 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PLOD3O60568 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.18■□□□□ 0.98
PLOD3O60568 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.18■□□□□ 0.98
PLOD3O60568 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
PLOD3O60568 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PLOD3O60568 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PLOD3O60568 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.18■□□□□ 0.98
PLOD3O60568 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.18■□□□□ 0.98
PLOD3O60568 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.17■□□□□ 0.98
PLOD3O60568 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
PLOD3O60568 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PLOD3O60568 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PLOD3O60568 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PLOD3O60568 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PLOD3O60568 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PLOD3O60568 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.17■□□□□ 0.98
PLOD3O60568 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
PLOD3O60568 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PLOD3O60568 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
PLOD3O60568 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PLOD3O60568 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
PLOD3O60568 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
PLOD3O60568 AC005703.6-201ENST00000623265 1329 ntBASIC21.16■□□□□ 0.98
PLOD3O60568 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
PLOD3O60568 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PLOD3O60568 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.16■□□□□ 0.98
PLOD3O60568 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.16■□□□□ 0.98
PLOD3O60568 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.16■□□□□ 0.98
PLOD3O60568 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
PLOD3O60568 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PLOD3O60568 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PLOD3O60568 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
PLOD3O60568 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.15■□□□□ 0.98
PLOD3O60568 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
PLOD3O60568 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
PLOD3O60568 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PLOD3O60568 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.15■□□□□ 0.98
PLOD3O60568 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PLOD3O60568 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
PLOD3O60568 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PLOD3O60568 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PLOD3O60568 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.14■□□□□ 0.97
PLOD3O60568 MTDHP2-201ENST00000601468 714 ntBASIC21.14■□□□□ 0.97
PLOD3O60568 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PLOD3O60568 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PLOD3O60568 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PLOD3O60568 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PLOD3O60568 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PLOD3O60568 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PLOD3O60568 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PLOD3O60568 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PLOD3O60568 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.13■□□□□ 0.97
PLOD3O60568 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.13■□□□□ 0.97
PLOD3O60568 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.13■□□□□ 0.97
PLOD3O60568 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PLOD3O60568 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PLOD3O60568 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PLOD3O60568 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
PLOD3O60568 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PLOD3O60568 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PLOD3O60568 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PLOD3O60568 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
PLOD3O60568 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PLOD3O60568 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
PLOD3O60568 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PLOD3O60568 AC010997.5-201ENST00000609182 354 ntBASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms