Protein–RNA interactions for Protein: O60343

TBC1D4, TBC1 domain family member 4, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D4O60343 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TBC1D4O60343 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
TBC1D4O60343 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.02■■□□□ 1.44
TBC1D4O60343 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TBC1D4O60343 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
TBC1D4O60343 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
TBC1D4O60343 AC105265.2-201ENST00000467189 838 ntBASIC24.02■■□□□ 1.44
TBC1D4O60343 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
TBC1D4O60343 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.02■■□□□ 1.44
TBC1D4O60343 MAG-206ENST00000597035 542 ntTSL 4 BASIC24.02■■□□□ 1.44
TBC1D4O60343 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC24.02■■□□□ 1.44
TBC1D4O60343 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TBC1D4O60343 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.01■■□□□ 1.43
TBC1D4O60343 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
TBC1D4O60343 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.01■■□□□ 1.43
TBC1D4O60343 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
TBC1D4O60343 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TBC1D4O60343 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC24.01■■□□□ 1.43
TBC1D4O60343 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TBC1D4O60343 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TBC1D4O60343 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
TBC1D4O60343 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TBC1D4O60343 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
TBC1D4O60343 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TBC1D4O60343 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TBC1D4O60343 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC24■■□□□ 1.43
TBC1D4O60343 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC24■■□□□ 1.43
TBC1D4O60343 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24■■□□□ 1.43
TBC1D4O60343 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TBC1D4O60343 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC24■■□□□ 1.43
TBC1D4O60343 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC24■■□□□ 1.43
TBC1D4O60343 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC24■■□□□ 1.43
TBC1D4O60343 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24■■□□□ 1.43
TBC1D4O60343 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC24■■□□□ 1.43
TBC1D4O60343 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC24■■□□□ 1.43
TBC1D4O60343 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC24■■□□□ 1.43
TBC1D4O60343 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC24■■□□□ 1.43
TBC1D4O60343 AC009086.3-201ENST00000623486 1008 ntBASIC24■■□□□ 1.43
TBC1D4O60343 RASA4CP-201ENST00000424092 1398 ntBASIC24■■□□□ 1.43
TBC1D4O60343 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
TBC1D4O60343 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
TBC1D4O60343 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TBC1D4O60343 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TBC1D4O60343 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.99■■□□□ 1.43
TBC1D4O60343 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TBC1D4O60343 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.99■■□□□ 1.43
TBC1D4O60343 AC104564.3-201ENST00000582367 638 ntBASIC23.99■■□□□ 1.43
TBC1D4O60343 CA15P2-201ENST00000611168 834 ntBASIC23.99■■□□□ 1.43
TBC1D4O60343 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TBC1D4O60343 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TBC1D4O60343 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TBC1D4O60343 AC020928.2-201ENST00000588717 2197 ntBASIC23.99■■□□□ 1.43
TBC1D4O60343 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
TBC1D4O60343 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TBC1D4O60343 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TBC1D4O60343 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TBC1D4O60343 AC026271.2-201ENST00000428091 497 ntBASIC23.98■■□□□ 1.43
TBC1D4O60343 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.98■■□□□ 1.43
TBC1D4O60343 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.98■■□□□ 1.43
TBC1D4O60343 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.98■■□□□ 1.43
TBC1D4O60343 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
TBC1D4O60343 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.98■■□□□ 1.43
TBC1D4O60343 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC23.97■■□□□ 1.43
TBC1D4O60343 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.97■■□□□ 1.43
TBC1D4O60343 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.97■■□□□ 1.43
TBC1D4O60343 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.96■■□□□ 1.43
TBC1D4O60343 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TBC1D4O60343 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.96■■□□□ 1.43
TBC1D4O60343 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.96■■□□□ 1.43
TBC1D4O60343 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.96■■□□□ 1.43
TBC1D4O60343 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TBC1D4O60343 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.96■■□□□ 1.43
TBC1D4O60343 AC027682.1-201ENST00000562846 899 ntBASIC23.96■■□□□ 1.43
TBC1D4O60343 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TBC1D4O60343 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TBC1D4O60343 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.96■■□□□ 1.43
TBC1D4O60343 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TBC1D4O60343 AC141586.4-201ENST00000624558 1573 ntBASIC23.95■■□□□ 1.43
TBC1D4O60343 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.43
TBC1D4O60343 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.95■■□□□ 1.43
TBC1D4O60343 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
TBC1D4O60343 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TBC1D4O60343 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
TBC1D4O60343 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TBC1D4O60343 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC23.95■■□□□ 1.42
TBC1D4O60343 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
TBC1D4O60343 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TBC1D4O60343 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.94■■□□□ 1.42
TBC1D4O60343 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.94■■□□□ 1.42
TBC1D4O60343 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.94■■□□□ 1.42
TBC1D4O60343 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TBC1D4O60343 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TBC1D4O60343 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
TBC1D4O60343 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TBC1D4O60343 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.94■■□□□ 1.42
TBC1D4O60343 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TBC1D4O60343 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TBC1D4O60343 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.93■■□□□ 1.42
TBC1D4O60343 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TBC1D4O60343 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms