Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SHOXO15266 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHOXO15266 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHOXO15266 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHOXO15266 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.17■□□□□ 0.66
SHOXO15266 AP003733.4-201ENST00000623785 1697 ntBASIC19.17■□□□□ 0.66
SHOXO15266 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHOXO15266 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SHOXO15266 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHOXO15266 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHOXO15266 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SHOXO15266 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC19.16■□□□□ 0.66
SHOXO15266 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.16■□□□□ 0.66
SHOXO15266 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHOXO15266 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHOXO15266 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHOXO15266 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SHOXO15266 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHOXO15266 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHOXO15266 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SHOXO15266 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.15■□□□□ 0.66
SHOXO15266 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHOXO15266 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SHOXO15266 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHOXO15266 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SHOXO15266 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHOXO15266 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHOXO15266 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHOXO15266 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.15■□□□□ 0.66
SHOXO15266 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHOXO15266 SLC6A10P-202ENST00000431994 2058 ntBASIC19.15■□□□□ 0.66
SHOXO15266 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SHOXO15266 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SHOXO15266 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SHOXO15266 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SHOXO15266 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHOXO15266 ABHD17AP3-201ENST00000503096 1137 ntBASIC19.14■□□□□ 0.65
SHOXO15266 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHOXO15266 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SHOXO15266 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHOXO15266 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.14■□□□□ 0.65
SHOXO15266 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHOXO15266 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SHOXO15266 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.13■□□□□ 0.65
SHOXO15266 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHOXO15266 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SHOXO15266 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHOXO15266 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SHOXO15266 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC19.13■□□□□ 0.65
SHOXO15266 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
SHOXO15266 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SHOXO15266 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHOXO15266 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
SHOXO15266 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHOXO15266 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHOXO15266 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SHOXO15266 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SHOXO15266 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHOXO15266 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
SHOXO15266 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
SHOXO15266 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.12■□□□□ 0.65
SHOXO15266 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.12■□□□□ 0.65
SHOXO15266 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHOXO15266 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHOXO15266 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHOXO15266 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHOXO15266 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SHOXO15266 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.12■□□□□ 0.65
SHOXO15266 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHOXO15266 ECEL1P1-201ENST00000373592 1742 ntBASIC19.11■□□□□ 0.65
SHOXO15266 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHOXO15266 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SHOXO15266 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHOXO15266 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SHOXO15266 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.11■□□□□ 0.65
SHOXO15266 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC19.11■□□□□ 0.65
SHOXO15266 AC026202.3-201ENST00000600805 1127 ntBASIC19.11■□□□□ 0.65
SHOXO15266 RAP2CP1-202ENST00000605179 643 ntBASIC19.11■□□□□ 0.65
SHOXO15266 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SHOXO15266 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SHOXO15266 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.11■□□□□ 0.65
SHOXO15266 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC19.11■□□□□ 0.65
SHOXO15266 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
SHOXO15266 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
SHOXO15266 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHOXO15266 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHOXO15266 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHOXO15266 KRT18P10-201ENST00000388836 1287 ntBASIC19.1■□□□□ 0.65
SHOXO15266 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHOXO15266 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHOXO15266 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.1■□□□□ 0.65
SHOXO15266 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.1■□□□□ 0.65
SHOXO15266 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
SHOXO15266 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHOXO15266 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHOXO15266 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHOXO15266 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHOXO15266 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHOXO15266 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
SHOXO15266 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms