Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC24.49■■□□□ 1.51
SOX1O00570 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC24.49■■□□□ 1.51
SOX1O00570 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
SOX1O00570 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.49■■□□□ 1.51
SOX1O00570 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
SOX1O00570 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC24.49■■□□□ 1.51
SOX1O00570 AP004609.3-201ENST00000610705 1884 ntBASIC24.49■■□□□ 1.51
SOX1O00570 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SOX1O00570 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC24.48■■□□□ 1.51
SOX1O00570 GUSBP6-202ENST00000438529 1198 ntBASIC24.48■■□□□ 1.51
SOX1O00570 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
SOX1O00570 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
SOX1O00570 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SOX1O00570 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.48■■□□□ 1.51
SOX1O00570 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC24.48■■□□□ 1.51
SOX1O00570 SHD-204ENST00000599689 1729 ntTSL 5 BASIC24.48■■□□□ 1.51
SOX1O00570 AC004854.2-201ENST00000608450 1441 ntBASIC24.48■■□□□ 1.51
SOX1O00570 AL050303.2-201ENST00000619798 666 ntBASIC24.48■■□□□ 1.51
SOX1O00570 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SOX1O00570 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
SOX1O00570 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
SOX1O00570 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SOX1O00570 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
SOX1O00570 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SOX1O00570 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.46■■□□□ 1.51
SOX1O00570 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
SOX1O00570 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
SOX1O00570 LHPP-203ENST00000392757 840 ntTSL 3 BASIC24.46■■□□□ 1.51
SOX1O00570 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
SOX1O00570 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC24.46■■□□□ 1.51
SOX1O00570 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.46■■□□□ 1.51
SOX1O00570 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC24.46■■□□□ 1.51
SOX1O00570 AC083906.2-201ENST00000511578 360 ntBASIC24.46■■□□□ 1.51
SOX1O00570 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SOX1O00570 AL121832.2-201ENST00000610979 668 ntBASIC24.46■■□□□ 1.51
SOX1O00570 AC091060.1-201ENST00000623524 1766 ntBASIC24.46■■□□□ 1.51
SOX1O00570 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
SOX1O00570 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
SOX1O00570 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
SOX1O00570 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SOX1O00570 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SOX1O00570 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.45■■□□□ 1.5
SOX1O00570 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC24.45■■□□□ 1.5
SOX1O00570 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC24.45■■□□□ 1.5
SOX1O00570 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.45■■□□□ 1.5
SOX1O00570 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC24.45■■□□□ 1.5
SOX1O00570 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC24.45■■□□□ 1.5
SOX1O00570 TPRG1LP1-201ENST00000598702 760 ntBASIC24.45■■□□□ 1.5
SOX1O00570 TBCB-214ENST00000629269 413 ntTSL 5 BASIC24.45■■□□□ 1.5
SOX1O00570 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
SOX1O00570 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SOX1O00570 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC24.44■■□□□ 1.5
SOX1O00570 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
SOX1O00570 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SOX1O00570 RPS2P52-201ENST00000469610 820 ntBASIC24.44■■□□□ 1.5
SOX1O00570 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SOX1O00570 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SOX1O00570 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC24.44■■□□□ 1.5
SOX1O00570 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC24.44■■□□□ 1.5
SOX1O00570 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC24.44■■□□□ 1.5
SOX1O00570 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SOX1O00570 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SOX1O00570 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.44■■□□□ 1.5
SOX1O00570 PRORSD1P-201ENST00000295112 541 ntBASIC24.43■■□□□ 1.5
SOX1O00570 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC24.43■■□□□ 1.5
SOX1O00570 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.43■■□□□ 1.5
SOX1O00570 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
SOX1O00570 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC24.43■■□□□ 1.5
SOX1O00570 ITM2C-210ENST00000620962 501 ntBASIC24.43■■□□□ 1.5
SOX1O00570 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.43■■□□□ 1.5
SOX1O00570 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC24.43■■□□□ 1.5
SOX1O00570 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SOX1O00570 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
SOX1O00570 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SOX1O00570 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC24.42■■□□□ 1.5
SOX1O00570 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC24.42■■□□□ 1.5
SOX1O00570 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
SOX1O00570 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
SOX1O00570 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
SOX1O00570 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC24.42■■□□□ 1.5
SOX1O00570 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SOX1O00570 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SOX1O00570 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SOX1O00570 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SOX1O00570 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC24.41■■□□□ 1.5
SOX1O00570 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC24.41■■□□□ 1.5
SOX1O00570 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC24.41■■□□□ 1.5
SOX1O00570 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
SOX1O00570 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC24.41■■□□□ 1.5
SOX1O00570 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
SOX1O00570 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SOX1O00570 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SOX1O00570 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
SOX1O00570 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
SOX1O00570 POU5F1P3-201ENST00000428824 1078 ntBASIC24.4■■□□□ 1.5
SOX1O00570 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SOX1O00570 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.4■■□□□ 1.5
SOX1O00570 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
SOX1O00570 SLC7A5P2-201ENST00000553010 536 ntBASIC24.4■■□□□ 1.5
SOX1O00570 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms