Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CACNB4O00305 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CACNB4O00305 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
CACNB4O00305 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CACNB4O00305 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CACNB4O00305 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC22.35■■□□□ 1.17
CACNB4O00305 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
CACNB4O00305 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.35■■□□□ 1.17
CACNB4O00305 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CACNB4O00305 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC22.34■■□□□ 1.17
CACNB4O00305 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CACNB4O00305 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.34■■□□□ 1.17
CACNB4O00305 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.34■■□□□ 1.17
CACNB4O00305 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.34■■□□□ 1.17
CACNB4O00305 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CACNB4O00305 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CACNB4O00305 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CACNB4O00305 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CACNB4O00305 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CACNB4O00305 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CACNB4O00305 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.33■■□□□ 1.17
CACNB4O00305 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.33■■□□□ 1.17
CACNB4O00305 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CACNB4O00305 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CACNB4O00305 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
CACNB4O00305 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CACNB4O00305 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.32■■□□□ 1.16
CACNB4O00305 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CACNB4O00305 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CACNB4O00305 SERBP1P1-201ENST00000396021 1160 ntBASIC22.32■■□□□ 1.16
CACNB4O00305 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.32■■□□□ 1.16
CACNB4O00305 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC22.32■■□□□ 1.16
CACNB4O00305 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CACNB4O00305 LINC01124-201ENST00000409786 2117 ntBASIC22.31■■□□□ 1.16
CACNB4O00305 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CACNB4O00305 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CACNB4O00305 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CACNB4O00305 EDA-201ENST00000338901 1233 ntBASIC22.31■■□□□ 1.16
CACNB4O00305 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CACNB4O00305 AC142381.2-201ENST00000566120 298 ntBASIC22.31■■□□□ 1.16
CACNB4O00305 AL138724.1-201ENST00000606771 1088 ntBASIC22.31■■□□□ 1.16
CACNB4O00305 AC009086.3-201ENST00000623486 1008 ntBASIC22.31■■□□□ 1.16
CACNB4O00305 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CACNB4O00305 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CACNB4O00305 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CACNB4O00305 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CACNB4O00305 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CACNB4O00305 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CACNB4O00305 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CACNB4O00305 LINC00543-201ENST00000567234 1845 ntBASIC22.3■■□□□ 1.16
CACNB4O00305 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CACNB4O00305 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CACNB4O00305 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.3■■□□□ 1.16
CACNB4O00305 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CACNB4O00305 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CACNB4O00305 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.29■■□□□ 1.16
CACNB4O00305 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CACNB4O00305 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CACNB4O00305 AL355001.2-201ENST00000620617 1191 ntBASIC22.29■■□□□ 1.16
CACNB4O00305 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CACNB4O00305 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CACNB4O00305 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CACNB4O00305 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CACNB4O00305 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CACNB4O00305 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CACNB4O00305 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.28■■□□□ 1.16
CACNB4O00305 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC22.28■■□□□ 1.16
CACNB4O00305 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC22.28■■□□□ 1.16
CACNB4O00305 AC011298.3-201ENST00000615796 283 ntBASIC22.28■■□□□ 1.16
CACNB4O00305 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CACNB4O00305 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.28■■□□□ 1.16
CACNB4O00305 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC22.28■■□□□ 1.16
CACNB4O00305 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
CACNB4O00305 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC22.27■■□□□ 1.16
CACNB4O00305 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.27■■□□□ 1.16
CACNB4O00305 AL139125.2-201ENST00000623134 1869 ntBASIC22.27■■□□□ 1.16
CACNB4O00305 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CACNB4O00305 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CACNB4O00305 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
CACNB4O00305 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CACNB4O00305 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
CACNB4O00305 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CACNB4O00305 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CACNB4O00305 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.26■■□□□ 1.15
CACNB4O00305 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CACNB4O00305 AC006455.2-201ENST00000429931 906 ntBASIC22.26■■□□□ 1.15
CACNB4O00305 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.26■■□□□ 1.15
CACNB4O00305 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CACNB4O00305 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CACNB4O00305 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CACNB4O00305 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CACNB4O00305 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CACNB4O00305 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CACNB4O00305 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.25■■□□□ 1.15
CACNB4O00305 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CACNB4O00305 MIR4767-201ENST00000582827 78 ntBASIC22.25■■□□□ 1.15
CACNB4O00305 AL031432.3-201ENST00000607698 485 ntBASIC22.25■■□□□ 1.15
CACNB4O00305 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.25■■□□□ 1.15
CACNB4O00305 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
CACNB4O00305 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms