Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CLIC1O00299 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.29■■□□□ 1
CLIC1O00299 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLIC1O00299 AC120024.1-201ENST00000562672 995 ntBASIC21.29■■□□□ 1
CLIC1O00299 NTF6A-201ENST00000591175 560 ntBASIC21.29■■□□□ 1
CLIC1O00299 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.29■■□□□ 1
CLIC1O00299 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.29■■□□□ 1
CLIC1O00299 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLIC1O00299 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CLIC1O00299 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.29■■□□□ 1
CLIC1O00299 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CLIC1O00299 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CLIC1O00299 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.28■■□□□ 1
CLIC1O00299 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.28■■□□□ 1
CLIC1O00299 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CLIC1O00299 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLIC1O00299 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.28■■□□□ 1
CLIC1O00299 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
CLIC1O00299 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
CLIC1O00299 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.28■■□□□ 1
CLIC1O00299 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLIC1O00299 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CLIC1O00299 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.27■■□□□ 1
CLIC1O00299 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLIC1O00299 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.27■■□□□ 1
CLIC1O00299 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.27■■□□□ 1
CLIC1O00299 BHLHE23-202ENST00000612929 1109 ntBASIC21.27■■□□□ 1
CLIC1O00299 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.27■■□□□ 1
CLIC1O00299 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CLIC1O00299 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CLIC1O00299 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.27■□□□□ 0.99
CLIC1O00299 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CLIC1O00299 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CLIC1O00299 EP400NL-214ENST00000641289 2402 ntBASIC21.26■□□□□ 0.99
CLIC1O00299 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
CLIC1O00299 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.26■□□□□ 0.99
CLIC1O00299 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.26■□□□□ 0.99
CLIC1O00299 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.26■□□□□ 0.99
CLIC1O00299 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLIC1O00299 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLIC1O00299 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLIC1O00299 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.26■□□□□ 0.99
CLIC1O00299 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLIC1O00299 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLIC1O00299 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CLIC1O00299 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC1O00299 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC1O00299 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC1O00299 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC1O00299 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.25■□□□□ 0.99
CLIC1O00299 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC1O00299 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC1O00299 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC1O00299 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC1O00299 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLIC1O00299 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLIC1O00299 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.24■□□□□ 0.99
CLIC1O00299 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLIC1O00299 AF131216.4-201ENST00000638924 1588 ntBASIC21.24■□□□□ 0.99
CLIC1O00299 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.24■□□□□ 0.99
CLIC1O00299 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CLIC1O00299 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLIC1O00299 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CLIC1O00299 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
CLIC1O00299 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLIC1O00299 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CLIC1O00299 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLIC1O00299 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CLIC1O00299 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLIC1O00299 KRT18P24-201ENST00000344739 1156 ntBASIC21.23■□□□□ 0.99
CLIC1O00299 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLIC1O00299 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLIC1O00299 AC074183.2-201ENST00000623112 922 ntBASIC21.23■□□□□ 0.99
CLIC1O00299 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLIC1O00299 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLIC1O00299 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.22■□□□□ 0.99
CLIC1O00299 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.22■□□□□ 0.99
CLIC1O00299 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.22■□□□□ 0.99
CLIC1O00299 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.22■□□□□ 0.99
CLIC1O00299 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
CLIC1O00299 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLIC1O00299 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.21■□□□□ 0.99
CLIC1O00299 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.21■□□□□ 0.99
CLIC1O00299 GUSBP5-202ENST00000510805 1989 ntBASIC21.21■□□□□ 0.99
CLIC1O00299 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC1O00299 AC079630.1-202ENST00000618127 1840 ntBASIC21.21■□□□□ 0.99
CLIC1O00299 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC1O00299 AC004987.1-201ENST00000428627 508 ntBASIC21.21■□□□□ 0.99
CLIC1O00299 MIR4281-201ENST00000580852 62 ntBASIC21.21■□□□□ 0.99
CLIC1O00299 THA1P-201ENST00000590384 1145 ntBASIC21.21■□□□□ 0.99
CLIC1O00299 PVT1_1.1-201ENST00000615125 194 ntBASIC21.21■□□□□ 0.99
CLIC1O00299 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.21■□□□□ 0.99
CLIC1O00299 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC1O00299 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC1O00299 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.21■□□□□ 0.99
CLIC1O00299 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC1O00299 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CLIC1O00299 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CLIC1O00299 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
CLIC1O00299 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms