Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.41■□□□□ 0.54
LINC00473A8K010 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LINC00473A8K010 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC00473A8K010 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC00473A8K010 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LINC00473A8K010 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.41■□□□□ 0.54
LINC00473A8K010 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.4■□□□□ 0.54
LINC00473A8K010 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC00473A8K010 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC00473A8K010 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
LINC00473A8K010 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.4■□□□□ 0.54
LINC00473A8K010 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.4■□□□□ 0.54
LINC00473A8K010 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC00473A8K010 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LINC00473A8K010 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.4■□□□□ 0.54
LINC00473A8K010 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LINC00473A8K010 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.54
LINC00473A8K010 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
LINC00473A8K010 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.39■□□□□ 0.54
LINC00473A8K010 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LINC00473A8K010 AL117328.2-201ENST00000624617 1940 ntBASIC18.39■□□□□ 0.53
LINC00473A8K010 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.39■□□□□ 0.53
LINC00473A8K010 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LINC00473A8K010 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.39■□□□□ 0.53
LINC00473A8K010 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.39■□□□□ 0.53
LINC00473A8K010 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.39■□□□□ 0.53
LINC00473A8K010 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LINC00473A8K010 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LINC00473A8K010 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LINC00473A8K010 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LINC00473A8K010 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LINC00473A8K010 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
LINC00473A8K010 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.38■□□□□ 0.53
LINC00473A8K010 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC00473A8K010 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC00473A8K010 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.38■□□□□ 0.53
LINC00473A8K010 AC004448.1-201ENST00000458332 883 ntBASIC18.38■□□□□ 0.53
LINC00473A8K010 AL033527.3-201ENST00000566366 1196 ntBASIC18.38■□□□□ 0.53
LINC00473A8K010 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC00473A8K010 MIR4508-201ENST00000584178 70 ntBASIC18.38■□□□□ 0.53
LINC00473A8K010 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC00473A8K010 AC012354.3-201ENST00000623734 483 ntBASIC18.38■□□□□ 0.53
LINC00473A8K010 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
LINC00473A8K010 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LINC00473A8K010 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LINC00473A8K010 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00473A8K010 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00473A8K010 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00473A8K010 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00473A8K010 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.37■□□□□ 0.53
LINC00473A8K010 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.37■□□□□ 0.53
LINC00473A8K010 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00473A8K010 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00473A8K010 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00473A8K010 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.37■□□□□ 0.53
LINC00473A8K010 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00473A8K010 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.37■□□□□ 0.53
LINC00473A8K010 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.37■□□□□ 0.53
LINC00473A8K010 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.37■□□□□ 0.53
LINC00473A8K010 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00473A8K010 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00473A8K010 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
LINC00473A8K010 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
LINC00473A8K010 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC00473A8K010 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC18.36■□□□□ 0.53
LINC00473A8K010 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.36■□□□□ 0.53
LINC00473A8K010 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.36■□□□□ 0.53
LINC00473A8K010 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
LINC00473A8K010 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.36■□□□□ 0.53
LINC00473A8K010 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LINC00473A8K010 AC079630.1-202ENST00000618127 1840 ntBASIC18.36■□□□□ 0.53
LINC00473A8K010 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.35■□□□□ 0.53
LINC00473A8K010 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00473A8K010 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00473A8K010 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00473A8K010 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00473A8K010 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
LINC00473A8K010 AC103834.1-201ENST00000520383 144 ntBASIC18.35■□□□□ 0.53
LINC00473A8K010 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00473A8K010 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00473A8K010 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LINC00473A8K010 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LINC00473A8K010 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
LINC00473A8K010 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00473A8K010 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00473A8K010 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00473A8K010 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00473A8K010 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00473A8K010 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00473A8K010 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00473A8K010 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.34■□□□□ 0.53
LINC00473A8K010 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00473A8K010 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00473A8K010 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LINC00473A8K010 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00473A8K010 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00473A8K010 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00473A8K010 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00473A8K010 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00473A8K010 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms