Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC196A0A1B0GTZ2 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.29■■□□□ 1.8
CCDC196A0A1B0GTZ2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
CCDC196A0A1B0GTZ2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.29■■□□□ 1.8
CCDC196A0A1B0GTZ2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CCDC196A0A1B0GTZ2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC196A0A1B0GTZ2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC196A0A1B0GTZ2 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC196A0A1B0GTZ2 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.28■■□□□ 1.8
CCDC196A0A1B0GTZ2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.28■■□□□ 1.8
CCDC196A0A1B0GTZ2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
CCDC196A0A1B0GTZ2 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC26.28■■□□□ 1.8
CCDC196A0A1B0GTZ2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
CCDC196A0A1B0GTZ2 ANOS2P-203ENST00000472227 1816 ntBASIC26.28■■□□□ 1.8
CCDC196A0A1B0GTZ2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCDC196A0A1B0GTZ2 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
CCDC196A0A1B0GTZ2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC196A0A1B0GTZ2 AL356441.2-201ENST00000443009 864 ntBASIC26.27■■□□□ 1.8
CCDC196A0A1B0GTZ2 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.27■■□□□ 1.8
CCDC196A0A1B0GTZ2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CCDC196A0A1B0GTZ2 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC26.27■■□□□ 1.8
CCDC196A0A1B0GTZ2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CCDC196A0A1B0GTZ2 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC196A0A1B0GTZ2 AC092068.2-201ENST00000590491 1708 ntBASIC26.26■■□□□ 1.79
CCDC196A0A1B0GTZ2 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.26■■□□□ 1.79
CCDC196A0A1B0GTZ2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC196A0A1B0GTZ2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC196A0A1B0GTZ2 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.26■■□□□ 1.79
CCDC196A0A1B0GTZ2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC26.26■■□□□ 1.79
CCDC196A0A1B0GTZ2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC196A0A1B0GTZ2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC196A0A1B0GTZ2 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCDC196A0A1B0GTZ2 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC196A0A1B0GTZ2 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC196A0A1B0GTZ2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CCDC196A0A1B0GTZ2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CCDC196A0A1B0GTZ2 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC26.25■■□□□ 1.79
CCDC196A0A1B0GTZ2 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC196A0A1B0GTZ2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC196A0A1B0GTZ2 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.24■■□□□ 1.79
CCDC196A0A1B0GTZ2 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.24■■□□□ 1.79
CCDC196A0A1B0GTZ2 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CCDC196A0A1B0GTZ2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC196A0A1B0GTZ2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC196A0A1B0GTZ2 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC196A0A1B0GTZ2 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC26.23■■□□□ 1.79
CCDC196A0A1B0GTZ2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC196A0A1B0GTZ2 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC26.23■■□□□ 1.79
CCDC196A0A1B0GTZ2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC196A0A1B0GTZ2 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC196A0A1B0GTZ2 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC196A0A1B0GTZ2 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.23■■□□□ 1.79
CCDC196A0A1B0GTZ2 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC196A0A1B0GTZ2 AL356740.2-201ENST00000601559 647 ntBASIC26.23■■□□□ 1.79
CCDC196A0A1B0GTZ2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
CCDC196A0A1B0GTZ2 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCDC196A0A1B0GTZ2 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
CCDC196A0A1B0GTZ2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.22■■□□□ 1.79
CCDC196A0A1B0GTZ2 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC196A0A1B0GTZ2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC196A0A1B0GTZ2 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC196A0A1B0GTZ2 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.22■■□□□ 1.79
CCDC196A0A1B0GTZ2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CCDC196A0A1B0GTZ2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
CCDC196A0A1B0GTZ2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.21■■□□□ 1.79
CCDC196A0A1B0GTZ2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC196A0A1B0GTZ2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC26.21■■□□□ 1.79
CCDC196A0A1B0GTZ2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC196A0A1B0GTZ2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.21■■□□□ 1.79
CCDC196A0A1B0GTZ2 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC196A0A1B0GTZ2 MIR3621-201ENST00000580529 85 ntBASIC26.21■■□□□ 1.79
CCDC196A0A1B0GTZ2 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC196A0A1B0GTZ2 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC196A0A1B0GTZ2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
CCDC196A0A1B0GTZ2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CCDC196A0A1B0GTZ2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CCDC196A0A1B0GTZ2 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
CCDC196A0A1B0GTZ2 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CCDC196A0A1B0GTZ2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
CCDC196A0A1B0GTZ2 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CCDC196A0A1B0GTZ2 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC26.2■■□□□ 1.78
CCDC196A0A1B0GTZ2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.2■■□□□ 1.78
CCDC196A0A1B0GTZ2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC26.2■■□□□ 1.78
CCDC196A0A1B0GTZ2 AL117332.1-201ENST00000622628 974 ntBASIC26.2■■□□□ 1.78
CCDC196A0A1B0GTZ2 AC009102.2-201ENST00000606772 1639 ntBASIC26.2■■□□□ 1.78
CCDC196A0A1B0GTZ2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCDC196A0A1B0GTZ2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.78
CCDC196A0A1B0GTZ2 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CCDC196A0A1B0GTZ2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC26.19■■□□□ 1.78
CCDC196A0A1B0GTZ2 RARA-203ENST00000394086 2008 ntTSL 2 BASIC26.19■■□□□ 1.78
CCDC196A0A1B0GTZ2 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CCDC196A0A1B0GTZ2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.19■■□□□ 1.78
CCDC196A0A1B0GTZ2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC26.19■■□□□ 1.78
CCDC196A0A1B0GTZ2 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CCDC196A0A1B0GTZ2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
CCDC196A0A1B0GTZ2 DUSP8P5-201ENST00000422884 1815 ntBASIC26.18■■□□□ 1.78
CCDC196A0A1B0GTZ2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
CCDC196A0A1B0GTZ2 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.18■■□□□ 1.78
CCDC196A0A1B0GTZ2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
CCDC196A0A1B0GTZ2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms