Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.75■□□□□ 0.27
TRAV12-3A0A0B4J271 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRAV12-3A0A0B4J271 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRAV12-3A0A0B4J271 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
TRAV12-3A0A0B4J271 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV12-3A0A0B4J271 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV12-3A0A0B4J271 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV12-3A0A0B4J271 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAV12-3A0A0B4J271 KRT8P33-201ENST00000508125 1423 ntBASIC16.74■□□□□ 0.27
TRAV12-3A0A0B4J271 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV12-3A0A0B4J271 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV12-3A0A0B4J271 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAV12-3A0A0B4J271 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.74■□□□□ 0.27
TRAV12-3A0A0B4J271 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV12-3A0A0B4J271 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV12-3A0A0B4J271 AC012676.1-201ENST00000574705 1949 ntBASIC16.74■□□□□ 0.27
TRAV12-3A0A0B4J271 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.74■□□□□ 0.27
TRAV12-3A0A0B4J271 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV12-3A0A0B4J271 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV12-3A0A0B4J271 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV12-3A0A0B4J271 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV12-3A0A0B4J271 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TRAV12-3A0A0B4J271 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
TRAV12-3A0A0B4J271 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV12-3A0A0B4J271 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV12-3A0A0B4J271 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC16.73■□□□□ 0.27
TRAV12-3A0A0B4J271 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV12-3A0A0B4J271 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV12-3A0A0B4J271 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV12-3A0A0B4J271 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV12-3A0A0B4J271 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
TRAV12-3A0A0B4J271 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC16.72■□□□□ 0.27
TRAV12-3A0A0B4J271 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV12-3A0A0B4J271 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRAV12-3A0A0B4J271 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV12-3A0A0B4J271 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TRAV12-3A0A0B4J271 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV12-3A0A0B4J271 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV12-3A0A0B4J271 AF131216.4-201ENST00000638924 1588 ntBASIC16.72■□□□□ 0.27
TRAV12-3A0A0B4J271 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV12-3A0A0B4J271 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV12-3A0A0B4J271 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
TRAV12-3A0A0B4J271 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV12-3A0A0B4J271 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV12-3A0A0B4J271 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV12-3A0A0B4J271 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV12-3A0A0B4J271 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV12-3A0A0B4J271 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TRAV12-3A0A0B4J271 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV12-3A0A0B4J271 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV12-3A0A0B4J271 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
TRAV12-3A0A0B4J271 YBX1P4-201ENST00000392794 808 ntBASIC16.71■□□□□ 0.27
TRAV12-3A0A0B4J271 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAV12-3A0A0B4J271 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV12-3A0A0B4J271 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV12-3A0A0B4J271 MIR4508-201ENST00000584178 70 ntBASIC16.71■□□□□ 0.27
TRAV12-3A0A0B4J271 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV12-3A0A0B4J271 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV12-3A0A0B4J271 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAV12-3A0A0B4J271 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC16.71■□□□□ 0.27
TRAV12-3A0A0B4J271 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV12-3A0A0B4J271 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV12-3A0A0B4J271 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV12-3A0A0B4J271 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV12-3A0A0B4J271 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV12-3A0A0B4J271 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV12-3A0A0B4J271 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV12-3A0A0B4J271 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
TRAV12-3A0A0B4J271 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC16.69■□□□□ 0.26
TRAV12-3A0A0B4J271 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV12-3A0A0B4J271 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV12-3A0A0B4J271 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV12-3A0A0B4J271 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC16.69■□□□□ 0.26
TRAV12-3A0A0B4J271 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.69■□□□□ 0.26
TRAV12-3A0A0B4J271 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV12-3A0A0B4J271 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms