Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
TRAV19A0A0A6YYK7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
TRAV19A0A0A6YYK7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.49■■□□□ 1.35
TRAV19A0A0A6YYK7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRAV19A0A0A6YYK7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRAV19A0A0A6YYK7 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.49■■□□□ 1.35
TRAV19A0A0A6YYK7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC23.49■■□□□ 1.35
TRAV19A0A0A6YYK7 AC008764.7-201ENST00000593779 1081 ntBASIC23.49■■□□□ 1.35
TRAV19A0A0A6YYK7 CA15P2-201ENST00000611168 834 ntBASIC23.49■■□□□ 1.35
TRAV19A0A0A6YYK7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
TRAV19A0A0A6YYK7 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
TRAV19A0A0A6YYK7 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
TRAV19A0A0A6YYK7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRAV19A0A0A6YYK7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.48■■□□□ 1.35
TRAV19A0A0A6YYK7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRAV19A0A0A6YYK7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRAV19A0A0A6YYK7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRAV19A0A0A6YYK7 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
TRAV19A0A0A6YYK7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
TRAV19A0A0A6YYK7 AC141586.4-201ENST00000624558 1573 ntBASIC23.48■■□□□ 1.35
TRAV19A0A0A6YYK7 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
TRAV19A0A0A6YYK7 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
TRAV19A0A0A6YYK7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRAV19A0A0A6YYK7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRAV19A0A0A6YYK7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.47■■□□□ 1.35
TRAV19A0A0A6YYK7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.47■■□□□ 1.35
TRAV19A0A0A6YYK7 pRNA.6-201ENST00000610482 90 ntBASIC23.47■■□□□ 1.35
TRAV19A0A0A6YYK7 pRNA.5-201ENST00000612139 90 ntBASIC23.47■■□□□ 1.35
TRAV19A0A0A6YYK7 pRNA.11-201ENST00000618423 90 ntBASIC23.47■■□□□ 1.35
TRAV19A0A0A6YYK7 pRNA.13-201ENST00000619112 90 ntBASIC23.47■■□□□ 1.35
TRAV19A0A0A6YYK7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRAV19A0A0A6YYK7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
TRAV19A0A0A6YYK7 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRAV19A0A0A6YYK7 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRAV19A0A0A6YYK7 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRAV19A0A0A6YYK7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRAV19A0A0A6YYK7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRAV19A0A0A6YYK7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
TRAV19A0A0A6YYK7 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRAV19A0A0A6YYK7 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.46■■□□□ 1.35
TRAV19A0A0A6YYK7 STOX2-205ENST00000513034 807 ntTSL 3 BASIC23.46■■□□□ 1.35
TRAV19A0A0A6YYK7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.46■■□□□ 1.35
TRAV19A0A0A6YYK7 RARRES2P6-201ENST00000567333 442 ntBASIC23.46■■□□□ 1.35
TRAV19A0A0A6YYK7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
TRAV19A0A0A6YYK7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC23.46■■□□□ 1.35
TRAV19A0A0A6YYK7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
TRAV19A0A0A6YYK7 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.35
TRAV19A0A0A6YYK7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
TRAV19A0A0A6YYK7 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
TRAV19A0A0A6YYK7 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.45■■□□□ 1.35
TRAV19A0A0A6YYK7 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
TRAV19A0A0A6YYK7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRAV19A0A0A6YYK7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
TRAV19A0A0A6YYK7 AC099791.1-201ENST00000416440 715 ntBASIC23.45■■□□□ 1.34
TRAV19A0A0A6YYK7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
TRAV19A0A0A6YYK7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.45■■□□□ 1.34
TRAV19A0A0A6YYK7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
TRAV19A0A0A6YYK7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.45■■□□□ 1.34
TRAV19A0A0A6YYK7 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.45■■□□□ 1.34
TRAV19A0A0A6YYK7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRAV19A0A0A6YYK7 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRAV19A0A0A6YYK7 AC020928.2-201ENST00000588717 2197 ntBASIC23.44■■□□□ 1.34
TRAV19A0A0A6YYK7 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.44■■□□□ 1.34
TRAV19A0A0A6YYK7 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC23.44■■□□□ 1.34
TRAV19A0A0A6YYK7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
TRAV19A0A0A6YYK7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.44■■□□□ 1.34
TRAV19A0A0A6YYK7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
TRAV19A0A0A6YYK7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRAV19A0A0A6YYK7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRAV19A0A0A6YYK7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TRAV19A0A0A6YYK7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TRAV19A0A0A6YYK7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
TRAV19A0A0A6YYK7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRAV19A0A0A6YYK7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRAV19A0A0A6YYK7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
TRAV19A0A0A6YYK7 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.43■■□□□ 1.34
TRAV19A0A0A6YYK7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.43■■□□□ 1.34
TRAV19A0A0A6YYK7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
TRAV19A0A0A6YYK7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRAV19A0A0A6YYK7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.42■■□□□ 1.34
TRAV19A0A0A6YYK7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.42■■□□□ 1.34
TRAV19A0A0A6YYK7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
TRAV19A0A0A6YYK7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRAV19A0A0A6YYK7 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
TRAV19A0A0A6YYK7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.42■■□□□ 1.34
TRAV19A0A0A6YYK7 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
TRAV19A0A0A6YYK7 AC233992.3-201ENST00000607491 485 ntBASIC23.42■■□□□ 1.34
TRAV19A0A0A6YYK7 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRAV19A0A0A6YYK7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
TRAV19A0A0A6YYK7 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.42■■□□□ 1.34
TRAV19A0A0A6YYK7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.42■■□□□ 1.34
TRAV19A0A0A6YYK7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.42■■□□□ 1.34
TRAV19A0A0A6YYK7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRAV19A0A0A6YYK7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRAV19A0A0A6YYK7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRAV19A0A0A6YYK7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRAV19A0A0A6YYK7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.41■■□□□ 1.34
TRAV19A0A0A6YYK7 BX842568.3-201ENST00000418104 571 ntBASIC23.41■■□□□ 1.34
TRAV19A0A0A6YYK7 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.41■■□□□ 1.34
TRAV19A0A0A6YYK7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.41■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 174.1 ms