Protein–RNA interactions for Protein: A0A0A6YYK6

TRAV16, T-cell receptor alpha variable 16 (Fragment), humanhuman

Predicted RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16A0A0A6YYK6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV16A0A0A6YYK6 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
TRAV16A0A0A6YYK6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV16A0A0A6YYK6 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV16A0A0A6YYK6 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRAV16A0A0A6YYK6 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV16A0A0A6YYK6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV16A0A0A6YYK6 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV16A0A0A6YYK6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV16A0A0A6YYK6 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC15.65■□□□□ 0.1
TRAV16A0A0A6YYK6 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV16A0A0A6YYK6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV16A0A0A6YYK6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV16A0A0A6YYK6 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV16A0A0A6YYK6 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV16A0A0A6YYK6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRAV16A0A0A6YYK6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC15.65■□□□□ 0.1
TRAV16A0A0A6YYK6 NTF6A-201ENST00000591175 560 ntBASIC15.65■□□□□ 0.1
TRAV16A0A0A6YYK6 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV16A0A0A6YYK6 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC15.65■□□□□ 0.1
TRAV16A0A0A6YYK6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV16A0A0A6YYK6 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRAV16A0A0A6YYK6 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV16A0A0A6YYK6 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRAV16A0A0A6YYK6 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV16A0A0A6YYK6 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV16A0A0A6YYK6 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV16A0A0A6YYK6 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV16A0A0A6YYK6 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TRAV16A0A0A6YYK6 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV16A0A0A6YYK6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV16A0A0A6YYK6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV16A0A0A6YYK6 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV16A0A0A6YYK6 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV16A0A0A6YYK6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TRAV16A0A0A6YYK6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV16A0A0A6YYK6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC15.64■□□□□ 0.09
TRAV16A0A0A6YYK6 SLC6A10P-202ENST00000431994 2058 ntBASIC15.64■□□□□ 0.09
TRAV16A0A0A6YYK6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV16A0A0A6YYK6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV16A0A0A6YYK6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV16A0A0A6YYK6 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV16A0A0A6YYK6 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV16A0A0A6YYK6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC15.63■□□□□ 0.09
TRAV16A0A0A6YYK6 SLC25A24-204ENST00000569674 2357 ntBASIC15.63■□□□□ 0.09
TRAV16A0A0A6YYK6 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TRAV16A0A0A6YYK6 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC15.63■□□□□ 0.09
TRAV16A0A0A6YYK6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
TRAV16A0A0A6YYK6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV16A0A0A6YYK6 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV16A0A0A6YYK6 HYI-210ENST00000486909 905 ntTSL 5 BASIC15.62■□□□□ 0.09
TRAV16A0A0A6YYK6 AL592293.1-201ENST00000502889 1188 ntBASIC15.62■□□□□ 0.09
TRAV16A0A0A6YYK6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV16A0A0A6YYK6 FOXO3B-201ENST00000395675 1928 ntBASIC15.62■□□□□ 0.09
TRAV16A0A0A6YYK6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV16A0A0A6YYK6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV16A0A0A6YYK6 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV16A0A0A6YYK6 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TRAV16A0A0A6YYK6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TRAV16A0A0A6YYK6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV16A0A0A6YYK6 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC15.61■□□□□ 0.09
TRAV16A0A0A6YYK6 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV16A0A0A6YYK6 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV16A0A0A6YYK6 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV16A0A0A6YYK6 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV16A0A0A6YYK6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV16A0A0A6YYK6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC15.61■□□□□ 0.09
TRAV16A0A0A6YYK6 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TRAV16A0A0A6YYK6 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV16A0A0A6YYK6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRAV16A0A0A6YYK6 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC15.6■□□□□ 0.09
TRAV16A0A0A6YYK6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TRAV16A0A0A6YYK6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV16A0A0A6YYK6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV16A0A0A6YYK6 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV16A0A0A6YYK6 MIR6765-201ENST00000614092 87 ntBASIC15.6■□□□□ 0.09
TRAV16A0A0A6YYK6 U85056.1-201ENST00000616429 682 ntBASIC15.6■□□□□ 0.09
TRAV16A0A0A6YYK6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV16A0A0A6YYK6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
TRAV16A0A0A6YYK6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
TRAV16A0A0A6YYK6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV16A0A0A6YYK6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TRAV16A0A0A6YYK6 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
TRAV16A0A0A6YYK6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV16A0A0A6YYK6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV16A0A0A6YYK6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV16A0A0A6YYK6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC15.59■□□□□ 0.09
TRAV16A0A0A6YYK6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TRAV16A0A0A6YYK6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV16A0A0A6YYK6 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC15.59■□□□□ 0.09
TRAV16A0A0A6YYK6 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV16A0A0A6YYK6 WWC2-AS2-201ENST00000578387 2183 ntBASIC15.59■□□□□ 0.09
TRAV16A0A0A6YYK6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TRAV16A0A0A6YYK6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV16A0A0A6YYK6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
TRAV16A0A0A6YYK6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV16A0A0A6YYK6 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV16A0A0A6YYK6 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TRAV16A0A0A6YYK6 ECEL1P1-201ENST00000373592 1742 ntBASIC15.58■□□□□ 0.08
TRAV16A0A0A6YYK6 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms