Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV18A0A075B6X5 AC090877.2-201ENST00000558441 1738 ntBASIC19.41■□□□□ 0.7
TRAV18A0A075B6X5 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
TRAV18A0A075B6X5 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV18A0A075B6X5 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV18A0A075B6X5 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TRAV18A0A075B6X5 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.41■□□□□ 0.7
TRAV18A0A075B6X5 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV18A0A075B6X5 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRAV18A0A075B6X5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRAV18A0A075B6X5 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
TRAV18A0A075B6X5 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV18A0A075B6X5 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC19.4■□□□□ 0.7
TRAV18A0A075B6X5 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.4■□□□□ 0.7
TRAV18A0A075B6X5 AC022413.1-201ENST00000624602 984 ntBASIC19.4■□□□□ 0.7
TRAV18A0A075B6X5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.4■□□□□ 0.7
TRAV18A0A075B6X5 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV18A0A075B6X5 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV18A0A075B6X5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRAV18A0A075B6X5 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRAV18A0A075B6X5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV18A0A075B6X5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV18A0A075B6X5 AC026202.3-201ENST00000600805 1127 ntBASIC19.39■□□□□ 0.69
TRAV18A0A075B6X5 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV18A0A075B6X5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TRAV18A0A075B6X5 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV18A0A075B6X5 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV18A0A075B6X5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
TRAV18A0A075B6X5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV18A0A075B6X5 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRAV18A0A075B6X5 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TRAV18A0A075B6X5 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV18A0A075B6X5 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV18A0A075B6X5 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV18A0A075B6X5 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV18A0A075B6X5 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.38■□□□□ 0.69
TRAV18A0A075B6X5 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV18A0A075B6X5 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TRAV18A0A075B6X5 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.38■□□□□ 0.69
TRAV18A0A075B6X5 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRAV18A0A075B6X5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV18A0A075B6X5 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
TRAV18A0A075B6X5 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.37■□□□□ 0.69
TRAV18A0A075B6X5 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV18A0A075B6X5 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV18A0A075B6X5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC19.37■□□□□ 0.69
TRAV18A0A075B6X5 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV18A0A075B6X5 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAV18A0A075B6X5 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV18A0A075B6X5 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV18A0A075B6X5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV18A0A075B6X5 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRAV18A0A075B6X5 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAV18A0A075B6X5 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.37■□□□□ 0.69
TRAV18A0A075B6X5 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV18A0A075B6X5 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRAV18A0A075B6X5 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRAV18A0A075B6X5 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV18A0A075B6X5 AC007375.3-201ENST00000600936 2314 ntBASIC19.36■□□□□ 0.69
TRAV18A0A075B6X5 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRAV18A0A075B6X5 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV18A0A075B6X5 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TRAV18A0A075B6X5 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TRAV18A0A075B6X5 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV18A0A075B6X5 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV18A0A075B6X5 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAV18A0A075B6X5 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TRAV18A0A075B6X5 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV18A0A075B6X5 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.36■□□□□ 0.69
TRAV18A0A075B6X5 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV18A0A075B6X5 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAV18A0A075B6X5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV18A0A075B6X5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV18A0A075B6X5 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRAV18A0A075B6X5 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV18A0A075B6X5 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRAV18A0A075B6X5 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV18A0A075B6X5 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.35■□□□□ 0.69
TRAV18A0A075B6X5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV18A0A075B6X5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAV18A0A075B6X5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.35■□□□□ 0.69
TRAV18A0A075B6X5 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV18A0A075B6X5 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV18A0A075B6X5 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRAV18A0A075B6X5 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV18A0A075B6X5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.34■□□□□ 0.69
TRAV18A0A075B6X5 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV18A0A075B6X5 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV18A0A075B6X5 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAV18A0A075B6X5 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV18A0A075B6X5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV18A0A075B6X5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAV18A0A075B6X5 AC242852.2-201ENST00000615738 1807 ntBASIC19.33■□□□□ 0.69
TRAV18A0A075B6X5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV18A0A075B6X5 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRAV18A0A075B6X5 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAV18A0A075B6X5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV18A0A075B6X5 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRAV18A0A075B6X5 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.32■□□□□ 0.68
TRAV18A0A075B6X5 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms