Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 AC011498.7-201ENST00000624986 2027 ntBASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 AC012441.2-201ENST00000444843 739 ntBASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 RPL13AP20-201ENST00000459725 609 ntBASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 RPSAP36-202ENST00000494591 1261 ntBASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 AP005597.1-201ENST00000534192 802 ntBASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 AC005951.1-201ENST00000576706 485 ntBASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 MIR4783-201ENST00000580343 82 ntBASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 AP005202.1-202ENST00000583065 748 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 AC090772.3-201ENST00000583267 735 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 KLK11-210ENST00000600362 759 ntTSL 3 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 AC009884.2-201ENST00000603110 324 ntBASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 AL162426.1-201ENST00000624141 743 ntBASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC16.11■□□□□ 0.17
PCDHB13Q9Y5F0 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 MTND4P13-201ENST00000402078 1023 ntBASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 RPS2P32-201ENST00000439199 892 ntBASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 HSPB1P2-201ENST00000448722 546 ntBASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 AC096947.1-201ENST00000603233 470 ntBASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 AL008721.1-201ENST00000609964 604 ntBASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 OR5AR1-201ENST00000624596 1026 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PCDHB13Q9Y5F0 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms