Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD248Q9HCU0 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD248Q9HCU0 TNN-202ENST00000621086 4234 ntTSL 5 BASIC15.2■□□□□ 0.02
CD248Q9HCU0 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
CD248Q9HCU0 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD248Q9HCU0 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CD248Q9HCU0 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD248Q9HCU0 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.2■□□□□ 0.02
CD248Q9HCU0 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC15.2■□□□□ 0.02
CD248Q9HCU0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.2■□□□□ 0.02
CD248Q9HCU0 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD248Q9HCU0 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CD248Q9HCU0 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD248Q9HCU0 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CD248Q9HCU0 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CD248Q9HCU0 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC15.2■□□□□ 0.02
CD248Q9HCU0 ELK2AP-201ENST00000392510 1007 ntBASIC15.2■□□□□ 0.02
CD248Q9HCU0 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CD248Q9HCU0 RN7SKP175-201ENST00000408472 289 ntBASIC15.2■□□□□ 0.02
CD248Q9HCU0 SPTLC1P5-201ENST00000450718 252 ntBASIC15.2■□□□□ 0.02
CD248Q9HCU0 AC022217.1-201ENST00000521069 738 ntBASIC15.2■□□□□ 0.02
CD248Q9HCU0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.2■□□□□ 0.02
CD248Q9HCU0 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.2■□□□□ 0.02
CD248Q9HCU0 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC15.2■□□□□ 0.02
CD248Q9HCU0 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CD248Q9HCU0 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC15.2■□□□□ 0.02
CD248Q9HCU0 MIR4683-201ENST00000579659 81 ntBASIC15.2■□□□□ 0.02
CD248Q9HCU0 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
CD248Q9HCU0 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.2■□□□□ 0.02
CD248Q9HCU0 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.2■□□□□ 0.02
CD248Q9HCU0 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD248Q9HCU0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CD248Q9HCU0 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.2■□□□□ 0.02
CD248Q9HCU0 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CD248Q9HCU0 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD248Q9HCU0 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD248Q9HCU0 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD248Q9HCU0 AC004899.2-201ENST00000622993 3860 ntBASIC15.2■□□□□ 0.02
CD248Q9HCU0 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD248Q9HCU0 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC15.2■□□□□ 0.02
CD248Q9HCU0 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CD248Q9HCU0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.2■□□□□ 0.02
CD248Q9HCU0 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CD248Q9HCU0 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CD248Q9HCU0 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD248Q9HCU0 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD248Q9HCU0 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CD248Q9HCU0 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC15.2■□□□□ 0.02
CD248Q9HCU0 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 STK40-201ENST00000359297 4837 ntTSL 2 BASIC15.19■□□□□ 0.02
CD248Q9HCU0 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.19■□□□□ 0.02
CD248Q9HCU0 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CD248Q9HCU0 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.19■□□□□ 0.02
CD248Q9HCU0 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 AC023090.2-201ENST00000625182 2110 ntBASIC15.19■□□□□ 0.02
CD248Q9HCU0 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CD248Q9HCU0 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC15.19■□□□□ 0.02
CD248Q9HCU0 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CD248Q9HCU0 AC092506.1-202ENST00000401022 528 ntBASIC15.19■□□□□ 0.02
CD248Q9HCU0 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CD248Q9HCU0 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC15.19■□□□□ 0.02
CD248Q9HCU0 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.19■□□□□ 0.02
CD248Q9HCU0 AC016629.1-201ENST00000596579 586 ntBASIC15.19■□□□□ 0.02
CD248Q9HCU0 BNIP3P13-201ENST00000599968 566 ntBASIC15.19■□□□□ 0.02
CD248Q9HCU0 AC097724.1-201ENST00000609581 426 ntBASIC15.19■□□□□ 0.02
CD248Q9HCU0 AC015967.2-201ENST00000624092 234 ntBASIC15.19■□□□□ 0.02
CD248Q9HCU0 AC006435.4-201ENST00000625037 234 ntBASIC15.19■□□□□ 0.02
CD248Q9HCU0 AL356737.1-201ENST00000634391 234 ntBASIC15.19■□□□□ 0.02
CD248Q9HCU0 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.19■□□□□ 0.02
CD248Q9HCU0 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
CD248Q9HCU0 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC15.19■□□□□ 0.02
CD248Q9HCU0 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.19■□□□□ 0.02
CD248Q9HCU0 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 KRT8P19-201ENST00000551916 1455 ntBASIC15.19■□□□□ 0.02
CD248Q9HCU0 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CD248Q9HCU0 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC15.19■□□□□ 0.02
CD248Q9HCU0 REXO1L4P-201ENST00000605109 1937 ntBASIC15.19■□□□□ 0.02
CD248Q9HCU0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.19■□□□□ 0.02
CD248Q9HCU0 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CD248Q9HCU0 FKBP4P6-201ENST00000457486 1332 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms