Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 AC079776.1-201ENST00000401540 1152 ntBASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 MIR1909-201ENST00000411312 80 ntBASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 AP001889.1-201ENST00000525414 633 ntBASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 RAB43P1-201ENST00000561790 589 ntBASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 RN7SL48P-201ENST00000579283 293 ntBASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 AL606495.2-201ENST00000605867 535 ntBASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
AMBRA1Q9C0C7 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 AC134312.5-201ENST00000568031 1313 ntBASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 AL928654.5-201ENST00000624831 2501 ntBASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 MIR658-201ENST00000385210 100 ntBASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 AC136604.1-202ENST00000425471 771 ntBASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 ACA64.2-201ENST00000459014 129 ntBASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 SLC25A47P1-201ENST00000531577 414 ntBASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 AC005586.2-201ENST00000563946 837 ntBASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 AC104506.1-201ENST00000609247 429 ntBASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
AMBRA1Q9C0C7 LINC02486-201ENST00000604157 3000 ntBASIC13.46□□□□□ -0.26
AMBRA1Q9C0C7 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC13.46□□□□□ -0.26
AMBRA1Q9C0C7 AL031719.1-201ENST00000623365 2587 ntBASIC13.46□□□□□ -0.26
AMBRA1Q9C0C7 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.46□□□□□ -0.26
AMBRA1Q9C0C7 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.46□□□□□ -0.26
AMBRA1Q9C0C7 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
AMBRA1Q9C0C7 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
AMBRA1Q9C0C7 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
AMBRA1Q9C0C7 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
AMBRA1Q9C0C7 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.46□□□□□ -0.26
AMBRA1Q9C0C7 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms