Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
USB1Q9BQ65 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.08□□□□□ -0.32
USB1Q9BQ65 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 CDC23-201ENST00000394884 1079 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 RN7SKP175-201ENST00000408472 289 ntBASIC13.08□□□□□ -0.32
USB1Q9BQ65 AL354877.1-201ENST00000424412 413 ntBASIC13.08□□□□□ -0.32
USB1Q9BQ65 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
USB1Q9BQ65 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 AL035414.1-201ENST00000451327 857 ntBASIC13.08□□□□□ -0.32
USB1Q9BQ65 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 OARD1-212ENST00000482515 832 ntTSL 2 BASIC13.08□□□□□ -0.32
USB1Q9BQ65 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 AC091804.1-201ENST00000486888 567 ntBASIC13.08□□□□□ -0.32
USB1Q9BQ65 RN7SL519P-201ENST00000497925 288 ntBASIC13.08□□□□□ -0.32
USB1Q9BQ65 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.08□□□□□ -0.32
USB1Q9BQ65 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.08□□□□□ -0.32
USB1Q9BQ65 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC13.08□□□□□ -0.32
USB1Q9BQ65 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
USB1Q9BQ65 MIR6787-201ENST00000616675 61 ntBASIC13.08□□□□□ -0.32
USB1Q9BQ65 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 AC002472.3-201ENST00000640124 621 ntBASIC13.08□□□□□ -0.32
USB1Q9BQ65 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.08□□□□□ -0.32
USB1Q9BQ65 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
USB1Q9BQ65 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC13.08□□□□□ -0.32
USB1Q9BQ65 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
USB1Q9BQ65 AL138725.1-201ENST00000407347 1314 ntBASIC13.08□□□□□ -0.32
USB1Q9BQ65 AC131649.1-201ENST00000569215 1313 ntBASIC13.08□□□□□ -0.32
USB1Q9BQ65 GRN-222ENST00000639447 1314 ntTSL 2 BASIC13.08□□□□□ -0.32
USB1Q9BQ65 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.08□□□□□ -0.32
USB1Q9BQ65 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.08□□□□□ -0.32
USB1Q9BQ65 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
USB1Q9BQ65 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
USB1Q9BQ65 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
USB1Q9BQ65 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
USB1Q9BQ65 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
USB1Q9BQ65 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
USB1Q9BQ65 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
USB1Q9BQ65 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
USB1Q9BQ65 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
USB1Q9BQ65 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.07□□□□□ -0.32
USB1Q9BQ65 AL353626.3-201ENST00000413399 657 ntBASIC13.07□□□□□ -0.32
USB1Q9BQ65 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
USB1Q9BQ65 GPAA1P2-201ENST00000417923 928 ntBASIC13.07□□□□□ -0.32
USB1Q9BQ65 SFR1P2-201ENST00000421841 730 ntBASIC13.07□□□□□ -0.32
USB1Q9BQ65 AL358176.4-201ENST00000428891 675 ntTSL 2 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 AC104306.2-201ENST00000451877 341 ntBASIC13.07□□□□□ -0.32
USB1Q9BQ65 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
USB1Q9BQ65 TYW3-205ENST00000479111 1130 ntTSL 3 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 AC243960.2-201ENST00000600996 747 ntBASIC13.07□□□□□ -0.32
USB1Q9BQ65 BX088702.1-201ENST00000610784 235 ntBASIC13.07□□□□□ -0.32
USB1Q9BQ65 KRT8P4-201ENST00000509735 1454 ntBASIC13.07□□□□□ -0.32
USB1Q9BQ65 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 UGT1A10-202ENST00000373445 2065 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
USB1Q9BQ65 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
USB1Q9BQ65 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
USB1Q9BQ65 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
USB1Q9BQ65 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
USB1Q9BQ65 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
USB1Q9BQ65 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
USB1Q9BQ65 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
USB1Q9BQ65 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.07□□□□□ -0.32
USB1Q9BQ65 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms