Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.68□□□□□ -0.38
AP3S1Q92572 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
AP3S1Q92572 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
AP3S1Q92572 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC12.67□□□□□ -0.38
AP3S1Q92572 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S1Q92572 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.67□□□□□ -0.38
AP3S1Q92572 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
AP3S1Q92572 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S1Q92572 RNF43-202ENST00000577625 2198 ntTSL 2 BASIC12.67□□□□□ -0.38
AP3S1Q92572 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
AP3S1Q92572 AC002350.2-201ENST00000623894 1828 ntBASIC12.67□□□□□ -0.38
AP3S1Q92572 AL138725.1-201ENST00000407347 1314 ntBASIC12.67□□□□□ -0.38
AP3S1Q92572 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.67□□□□□ -0.38
AP3S1Q92572 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S1Q92572 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.67□□□□□ -0.38
AP3S1Q92572 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S1Q92572 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S1Q92572 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S1Q92572 IL10-202ENST00000423557 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S1Q92572 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S1Q92572 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
AP3S1Q92572 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC12.67□□□□□ -0.38
AP3S1Q92572 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
AP3S1Q92572 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC12.67□□□□□ -0.38
AP3S1Q92572 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.67□□□□□ -0.38
AP3S1Q92572 AL161932.2-201ENST00000435436 679 ntBASIC12.67□□□□□ -0.38
AP3S1Q92572 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC12.67□□□□□ -0.38
AP3S1Q92572 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.67□□□□□ -0.38
AP3S1Q92572 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S1Q92572 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.67□□□□□ -0.38
AP3S1Q92572 AC026410.3-201ENST00000514280 936 ntBASIC12.67□□□□□ -0.38
AP3S1Q92572 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.67□□□□□ -0.38
AP3S1Q92572 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.67□□□□□ -0.38
AP3S1Q92572 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
AP3S1Q92572 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.67□□□□□ -0.38
AP3S1Q92572 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.67□□□□□ -0.38
AP3S1Q92572 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.67□□□□□ -0.38
AP3S1Q92572 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.67□□□□□ -0.38
AP3S1Q92572 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.67□□□□□ -0.38
AP3S1Q92572 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.67□□□□□ -0.38
AP3S1Q92572 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
AP3S1Q92572 AL691432.3-201ENST00000621860 400 ntBASIC12.67□□□□□ -0.38
AP3S1Q92572 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.67□□□□□ -0.38
AP3S1Q92572 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S1Q92572 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S1Q92572 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S1Q92572 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
AP3S1Q92572 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
AP3S1Q92572 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.67□□□□□ -0.38
AP3S1Q92572 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
AP3S1Q92572 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S1Q92572 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.67□□□□□ -0.38
AP3S1Q92572 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S1Q92572 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S1Q92572 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S1Q92572 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S1Q92572 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S1Q92572 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.67□□□□□ -0.38
AP3S1Q92572 ACTN1-204ENST00000438964 3043 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S1Q92572 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S1Q92572 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
AP3S1Q92572 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC12.67□□□□□ -0.38
AP3S1Q92572 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S1Q92572 AC027369.3-201ENST00000530465 3707 ntBASIC12.66□□□□□ -0.38
AP3S1Q92572 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC12.66□□□□□ -0.38
AP3S1Q92572 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
AP3S1Q92572 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
AP3S1Q92572 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.66□□□□□ -0.38
AP3S1Q92572 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
AP3S1Q92572 SYK-204ENST00000375754 5005 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S1Q92572 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S1Q92572 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.66□□□□□ -0.38
AP3S1Q92572 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S1Q92572 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S1Q92572 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
AP3S1Q92572 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S1Q92572 AL590440.2-201ENST00000641973 1595 ntBASIC12.66□□□□□ -0.38
AP3S1Q92572 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S1Q92572 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S1Q92572 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S1Q92572 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S1Q92572 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
AP3S1Q92572 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
AP3S1Q92572 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S1Q92572 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
AP3S1Q92572 RBPMS2P1-201ENST00000437762 623 ntBASIC12.66□□□□□ -0.38
AP3S1Q92572 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.66□□□□□ -0.38
AP3S1Q92572 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S1Q92572 SPDYE14P-201ENST00000442619 822 ntBASIC12.66□□□□□ -0.38
AP3S1Q92572 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.66□□□□□ -0.38
AP3S1Q92572 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.66□□□□□ -0.38
AP3S1Q92572 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
AP3S1Q92572 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC12.66□□□□□ -0.38
AP3S1Q92572 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.66□□□□□ -0.38
AP3S1Q92572 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.66□□□□□ -0.38
AP3S1Q92572 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.66□□□□□ -0.38
AP3S1Q92572 AC027237.1-201ENST00000560942 655 ntBASIC12.66□□□□□ -0.38
AP3S1Q92572 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
AP3S1Q92572 AC138761.1-201ENST00000584393 385 ntBASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms