Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.62□□□□□ -0.23
TM9SF4Q92544 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 SPCS2P2-201ENST00000603270 608 ntBASIC13.62□□□□□ -0.23
TM9SF4Q92544 AC012044.1-201ENST00000603431 297 ntBASIC13.62□□□□□ -0.23
TM9SF4Q92544 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
TM9SF4Q92544 MIR6720-201ENST00000611664 98 ntBASIC13.62□□□□□ -0.23
TM9SF4Q92544 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.62□□□□□ -0.23
TM9SF4Q92544 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 AC023090.2-201ENST00000625182 2110 ntBASIC13.62□□□□□ -0.23
TM9SF4Q92544 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
TM9SF4Q92544 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
TM9SF4Q92544 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
TM9SF4Q92544 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
TM9SF4Q92544 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.62□□□□□ -0.23
TM9SF4Q92544 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
TM9SF4Q92544 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.62□□□□□ -0.23
TM9SF4Q92544 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.62□□□□□ -0.23
TM9SF4Q92544 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.62□□□□□ -0.23
TM9SF4Q92544 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TM9SF4Q92544 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 AC020910.5-201ENST00000623668 1865 ntBASIC13.61□□□□□ -0.23
TM9SF4Q92544 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
TM9SF4Q92544 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.61□□□□□ -0.23
TM9SF4Q92544 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TM9SF4Q92544 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.61□□□□□ -0.23
TM9SF4Q92544 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.61□□□□□ -0.23
TM9SF4Q92544 MPV17-204ENST00000399052 749 ntTSL 4 BASIC13.61□□□□□ -0.23
TM9SF4Q92544 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TM9SF4Q92544 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.61□□□□□ -0.23
TM9SF4Q92544 HLA-J-204ENST00000495278 958 ntBASIC13.61□□□□□ -0.23
TM9SF4Q92544 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.61□□□□□ -0.23
TM9SF4Q92544 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.61□□□□□ -0.23
TM9SF4Q92544 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 RTN3P1-201ENST00000536295 711 ntBASIC13.61□□□□□ -0.23
TM9SF4Q92544 AL160314.3-201ENST00000556041 767 ntBASIC13.61□□□□□ -0.23
TM9SF4Q92544 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.61□□□□□ -0.23
TM9SF4Q92544 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC13.61□□□□□ -0.23
TM9SF4Q92544 MIR7845-201ENST00000618396 99 ntBASIC13.61□□□□□ -0.23
TM9SF4Q92544 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 AC027601.3-201ENST00000622907 509 ntBASIC13.61□□□□□ -0.23
TM9SF4Q92544 AC006453.1-201ENST00000636037 1257 ntBASIC13.61□□□□□ -0.23
TM9SF4Q92544 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
TM9SF4Q92544 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.61□□□□□ -0.23
TM9SF4Q92544 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.61□□□□□ -0.23
TM9SF4Q92544 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TM9SF4Q92544 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.61□□□□□ -0.23
TM9SF4Q92544 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TM9SF4Q92544 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TM9SF4Q92544 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TM9SF4Q92544 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.61□□□□□ -0.23
TM9SF4Q92544 AC009093.2-202ENST00000620513 2079 ntBASIC13.6□□□□□ -0.23
TM9SF4Q92544 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TM9SF4Q92544 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 LILRP1-201ENST00000444199 1370 ntBASIC13.6□□□□□ -0.23
TM9SF4Q92544 AC244394.1-201ENST00000435000 1665 ntBASIC13.6□□□□□ -0.23
TM9SF4Q92544 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TM9SF4Q92544 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms