Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 DUX4L47-201ENST00000566374 394 ntBASIC12.51□□□□□ -0.41
CCDC107Q8WV48 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 KRT8P35-201ENST00000483942 1338 ntBASIC12.51□□□□□ -0.41
CCDC107Q8WV48 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.51□□□□□ -0.41
CCDC107Q8WV48 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 AC073869.1-201ENST00000415574 2762 ntBASIC12.51□□□□□ -0.41
CCDC107Q8WV48 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 AL023775.1-201ENST00000454907 1746 ntBASIC12.51□□□□□ -0.41
CCDC107Q8WV48 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CCDC107Q8WV48 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 KCNJ5-202ENST00000529694 5940 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 LINC02560-201ENST00000596379 459 ntBASIC12.5□□□□□ -0.41
CCDC107Q8WV48 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 TMEM261P1-201ENST00000604899 340 ntBASIC12.5□□□□□ -0.41
CCDC107Q8WV48 AC008494.3-201ENST00000606615 944 ntBASIC12.5□□□□□ -0.41
CCDC107Q8WV48 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 AJ011932.1-201ENST00000621707 465 ntBASIC12.5□□□□□ -0.41
CCDC107Q8WV48 AC005252.2-201ENST00000624630 1141 ntBASIC12.5□□□□□ -0.41
CCDC107Q8WV48 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 AL391825.1-201ENST00000457671 1364 ntBASIC12.5□□□□□ -0.41
CCDC107Q8WV48 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 HSPA8P5-201ENST00000456928 2069 ntBASIC12.5□□□□□ -0.41
CCDC107Q8WV48 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CCDC107Q8WV48 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CCDC107Q8WV48 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms