Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 H1FOO-202ENST00000503977 881 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 PDPN-208ENST00000509009 571 ntTSL 4 BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 AC022634.2-201ENST00000521504 382 ntTSL 3 BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 HAX1-211ENST00000532105 771 ntTSL 3 BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 RAB42P1-201ENST00000555078 316 ntBASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 MIR4526-201ENST00000583168 87 ntBASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 FMO6P-201ENST00000236166 1620 ntBASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 AC106872.9-201ENST00000512437 1393 ntBASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COL22A1Q8NFW1 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 LCE4A-201ENST00000335535 388 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 AC138392.1-201ENST00000427577 921 ntBASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 ABCC6P2-201ENST00000526069 590 ntBASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 ZFYVE1-206ENST00000555072 1225 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 LINC00677-201ENST00000558224 486 ntTSL 3 BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 AL139260.3-204ENST00000621281 609 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 MIEF1-215ENST00000637854 213 ntBASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 ADK-205ENST00000539909 1866 ntTSL 2 BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 LINC01137-201ENST00000424989 1395 ntTSL 2 BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC18.24■□□□□ 0.51
COL22A1Q8NFW1 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 PAEP-201ENST00000277508 821 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 TPT1-201ENST00000309246 1008 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 SNORA30.1-201ENST00000363193 129 ntBASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 TRBV20OR9-2-201ENST00000379435 416 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 HAX1-204ENST00000457918 914 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 AC116552.1-201ENST00000563243 733 ntTSL 3 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 AL356740.1-201ENST00000602192 1297 ntBASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 Metazoa_SRP.152-201ENST00000614413 286 ntBASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 AP000437.1-201ENST00000624057 2085 ntBASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 RCC2P5-201ENST00000492126 1487 ntBASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 MRPL55-210ENST00000366736 660 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 AL137077.1-201ENST00000442115 528 ntBASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC18.23■□□□□ 0.51
COL22A1Q8NFW1 AC008267.3-201ENST00000448776 712 ntBASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms