Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRIM50Q86XT4 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRIM50Q86XT4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 LINC01815-202ENST00000641468 1409 ntBASIC15.95■□□□□ 0.14
TRIM50Q86XT4 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 AL591122.2-201ENST00000624125 1853 ntBASIC15.95■□□□□ 0.14
TRIM50Q86XT4 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 RPL18AP8-201ENST00000486071 528 ntBASIC15.95■□□□□ 0.14
TRIM50Q86XT4 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 AC095040.1-201ENST00000513286 675 ntBASIC15.95■□□□□ 0.14
TRIM50Q86XT4 DNM1P30-201ENST00000563586 452 ntBASIC15.95■□□□□ 0.14
TRIM50Q86XT4 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM50Q86XT4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 HIST2H2BA-201ENST00000412169 381 ntBASIC15.94■□□□□ 0.14
TRIM50Q86XT4 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 TPT1P11-201ENST00000458482 498 ntBASIC15.94■□□□□ 0.14
TRIM50Q86XT4 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 MIR4649-201ENST00000582839 64 ntBASIC15.94■□□□□ 0.14
TRIM50Q86XT4 MIR6074-201ENST00000612054 107 ntBASIC15.94■□□□□ 0.14
TRIM50Q86XT4 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 AC140479.7-201ENST00000636301 2332 ntBASIC15.94■□□□□ 0.14
TRIM50Q86XT4 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.94■□□□□ 0.14
TRIM50Q86XT4 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.93■□□□□ 0.14
TRIM50Q86XT4 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms