Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
LYSMD3Q7Z3D4 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LYSMD3Q7Z3D4 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 AC125604.1-201ENST00000496255 707 ntBASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 AL645939.5-201ENST00000606834 243 ntBASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 AC026740.1-201ENST00000607068 791 ntBASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 AC090386.2-201ENST00000623010 1039 ntBASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LYSMD3Q7Z3D4 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 TUBB8P4-201ENST00000511806 1324 ntBASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 AL365209.1-201ENST00000624418 6473 ntBASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 CALR4P-201ENST00000431943 946 ntBASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 BX284668.4-201ENST00000453917 508 ntBASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 AL591471.1-201ENST00000621855 229 ntBASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LYSMD3Q7Z3D4 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms