Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 PAX6-257ENST00000639409 2450 ntAPPRIS P4 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 EMG1-202ENST00000599672 4898 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 CDH1-212ENST00000611625 4878 ntTSL 5 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 POLA2-201ENST00000265465 3744 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 HIRIP3-201ENST00000279392 3388 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 RGS7BP-201ENST00000334025 4160 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 CNGA3-203ENST00000393504 3841 ntAPPRIS P3 TSL 5 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 RASAL1-203ENST00000446861 3040 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 TPT1-212ENST00000530705 4735 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 ZBTB43-202ENST00000373464 5965 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 ZSCAN21-205ENST00000543588 1870 ntTSL 2 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 THSD7A-202ENST00000423059 10663 ntAPPRIS P2 TSL 5 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 USP33-204ENST00000370794 4327 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 IRF5-213ENST00000489702 2988 ntTSL 5 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 H1FX-AS1-201ENST00000383461 2600 ntTSL 2 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 OTUD6B-206ENST00000617869 3294 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 SLC4A1APP2-201ENST00000424054 1259 ntBASIC7.28□□□□□ -1.24
LINC01554Q52M75 FAM210CP-201ENST00000445714 574 ntBASIC7.28□□□□□ -1.24
LINC01554Q52M75 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 SAPCD2P3-201ENST00000455031 850 ntBASIC7.28□□□□□ -1.24
LINC01554Q52M75 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 KRT18P35-201ENST00000510488 1269 ntBASIC7.28□□□□□ -1.24
LINC01554Q52M75 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 CD63-210ENST00000550776 870 ntTSL 5 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 AC025062.2-201ENST00000605477 670 ntBASIC7.28□□□□□ -1.24
LINC01554Q52M75 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 AC107918.4-202ENST00000641623 219 ntBASIC7.28□□□□□ -1.24
LINC01554Q52M75 AL136295.4-201ENST00000561419 4351 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 PCBP1-AS1-227ENST00000435880 2386 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 TMEM107-208ENST00000532998 2358 ntTSL 2 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 EXOC7-201ENST00000332065 4596 ntAPPRIS P3 TSL 2 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 FAM214B-201ENST00000322813 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 C1orf127-201ENST00000377004 2761 ntAPPRIS P2 TSL 5 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 CLINT1-201ENST00000411809 3440 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 TBC1D14-201ENST00000409757 4925 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 ISM2-202ENST00000342219 2971 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 SYNJ1-202ENST00000382491 6958 ntTSL 5 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 DLX4-206ENST00000611342 1662 ntBASIC7.28□□□□□ -1.24
LINC01554Q52M75 DNASE1-202ENST00000407479 8552 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 PLK4-203ENST00000507249 3195 ntAPPRIS ALT2 TSL 5 BASIC7.28□□□□□ -1.24
LINC01554Q52M75 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 RHBDL3-201ENST00000269051 4661 ntAPPRIS P3 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 NLRP1-208ENST00000571451 5444 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 CPT1B-204ENST00000405237 2647 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 SCNN1A-203ENST00000360168 3481 ntAPPRIS ALT2 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 INHBC-201ENST00000309668 1992 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 ZFAT-202ENST00000429442 4421 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
LINC01554Q52M75 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
LINC01554Q52M75 IREB2-208ENST00000560440 4396 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
LINC01554Q52M75 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms