Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.73□□□□□ -0.21
CLDN6P56747 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.73□□□□□ -0.21
CLDN6P56747 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CLDN6P56747 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CLDN6P56747 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CLDN6P56747 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.72□□□□□ -0.21
CLDN6P56747 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
CLDN6P56747 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CLDN6P56747 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.72□□□□□ -0.21
CLDN6P56747 AL009178.2-201ENST00000597278 2719 ntBASIC13.72□□□□□ -0.21
CLDN6P56747 FAM45BP-202ENST00000592932 1624 ntBASIC13.72□□□□□ -0.21
CLDN6P56747 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.72□□□□□ -0.21
CLDN6P56747 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.72□□□□□ -0.21
CLDN6P56747 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CLDN6P56747 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.72□□□□□ -0.21
CLDN6P56747 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 MIR566-201ENST00000385187 94 ntBASIC13.72□□□□□ -0.21
CLDN6P56747 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
CLDN6P56747 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC13.72□□□□□ -0.21
CLDN6P56747 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CLDN6P56747 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC13.72□□□□□ -0.21
CLDN6P56747 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.72□□□□□ -0.21
CLDN6P56747 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC13.72□□□□□ -0.21
CLDN6P56747 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC13.72□□□□□ -0.21
CLDN6P56747 RN7SL665P-201ENST00000578793 300 ntBASIC13.72□□□□□ -0.21
CLDN6P56747 TRMT112P3-201ENST00000580149 358 ntBASIC13.72□□□□□ -0.21
CLDN6P56747 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.72□□□□□ -0.21
CLDN6P56747 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC13.72□□□□□ -0.21
CLDN6P56747 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC13.72□□□□□ -0.21
CLDN6P56747 ST5-261ENST00000626808 1071 ntTSL 5 BASIC13.72□□□□□ -0.21
CLDN6P56747 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CLDN6P56747 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.72□□□□□ -0.21
CLDN6P56747 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.72□□□□□ -0.21
CLDN6P56747 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC13.72□□□□□ -0.21
CLDN6P56747 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CLDN6P56747 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.71□□□□□ -0.21
CLDN6P56747 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CLDN6P56747 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
CLDN6P56747 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CLDN6P56747 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN6P56747 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN6P56747 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN6P56747 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN6P56747 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN6P56747 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.71□□□□□ -0.21
CLDN6P56747 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN6P56747 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN6P56747 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.71□□□□□ -0.21
CLDN6P56747 NME4-203ENST00000397722 1232 ntTSL 2 BASIC13.71□□□□□ -0.21
CLDN6P56747 KRT18P46-201ENST00000435568 1279 ntBASIC13.71□□□□□ -0.21
CLDN6P56747 SCARNA12-201ENST00000459155 270 ntBASIC13.71□□□□□ -0.21
CLDN6P56747 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC13.71□□□□□ -0.21
CLDN6P56747 MIR5001-201ENST00000580185 100 ntBASIC13.71□□□□□ -0.21
CLDN6P56747 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN6P56747 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN6P56747 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN6P56747 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN6P56747 CICP24-201ENST00000605464 2705 ntBASIC13.71□□□□□ -0.21
CLDN6P56747 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN6P56747 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CLDN6P56747 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CLDN6P56747 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CLDN6P56747 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CLDN6P56747 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CLDN6P56747 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CLDN6P56747 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CLDN6P56747 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.22
CLDN6P56747 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CLDN6P56747 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CLDN6P56747 AL672207.1-201ENST00000328462 1570 ntBASIC13.71□□□□□ -0.22
CLDN6P56747 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.71□□□□□ -0.22
CLDN6P56747 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CLDN6P56747 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms