Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
LIMK2P53671 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK2P53671 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK2P53671 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.49□□□□□ -0.09
LIMK2P53671 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK2P53671 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.49□□□□□ -0.09
LIMK2P53671 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.49□□□□□ -0.09
LIMK2P53671 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK2P53671 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK2P53671 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
LIMK2P53671 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.49□□□□□ -0.09
LIMK2P53671 HIST2H2BB-201ENST00000449108 381 ntBASIC14.49□□□□□ -0.09
LIMK2P53671 IGHJ2P-201ENST00000454480 60 ntBASIC14.49□□□□□ -0.09
LIMK2P53671 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC14.49□□□□□ -0.09
LIMK2P53671 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.49□□□□□ -0.09
LIMK2P53671 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.49□□□□□ -0.09
LIMK2P53671 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.49□□□□□ -0.09
LIMK2P53671 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LIMK2P53671 ACTG1P17-201ENST00000558391 1119 ntBASIC14.49□□□□□ -0.09
LIMK2P53671 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC14.49□□□□□ -0.09
LIMK2P53671 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
LIMK2P53671 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.49□□□□□ -0.09
LIMK2P53671 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC14.49□□□□□ -0.09
LIMK2P53671 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
LIMK2P53671 AL451050.2-201ENST00000606967 682 ntBASIC14.49□□□□□ -0.09
LIMK2P53671 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK2P53671 AC027601.3-201ENST00000622907 509 ntBASIC14.49□□□□□ -0.09
LIMK2P53671 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK2P53671 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK2P53671 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK2P53671 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
LIMK2P53671 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK2P53671 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK2P53671 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC14.49□□□□□ -0.09
LIMK2P53671 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK2P53671 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.49□□□□□ -0.09
LIMK2P53671 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK2P53671 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK2P53671 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.49□□□□□ -0.09
LIMK2P53671 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK2P53671 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
LIMK2P53671 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK2P53671 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
LIMK2P53671 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC14.48□□□□□ -0.09
LIMK2P53671 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC14.48□□□□□ -0.09
LIMK2P53671 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK2P53671 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LIMK2P53671 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
LIMK2P53671 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK2P53671 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.48□□□□□ -0.09
LIMK2P53671 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK2P53671 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK2P53671 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK2P53671 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK2P53671 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK2P53671 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK2P53671 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK2P53671 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
LIMK2P53671 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
LIMK2P53671 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK2P53671 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK2P53671 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.48□□□□□ -0.09
LIMK2P53671 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK2P53671 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK2P53671 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
LIMK2P53671 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK2P53671 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK2P53671 HNRNPA1P27-201ENST00000412087 955 ntBASIC14.48□□□□□ -0.09
LIMK2P53671 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LIMK2P53671 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.48□□□□□ -0.09
LIMK2P53671 AL354877.1-201ENST00000424412 413 ntBASIC14.48□□□□□ -0.09
LIMK2P53671 AC005077.2-201ENST00000449786 690 ntBASIC14.48□□□□□ -0.09
LIMK2P53671 AC100850.1-201ENST00000506768 649 ntBASIC14.48□□□□□ -0.09
LIMK2P53671 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.48□□□□□ -0.09
LIMK2P53671 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.48□□□□□ -0.09
LIMK2P53671 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC14.48□□□□□ -0.09
LIMK2P53671 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.48□□□□□ -0.09
LIMK2P53671 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.48□□□□□ -0.09
LIMK2P53671 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK2P53671 AL358472.3-201ENST00000608147 415 ntBASIC14.48□□□□□ -0.09
LIMK2P53671 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.48□□□□□ -0.09
LIMK2P53671 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.48□□□□□ -0.09
LIMK2P53671 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK2P53671 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.48□□□□□ -0.09
LIMK2P53671 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
LIMK2P53671 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK2P53671 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK2P53671 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.48□□□□□ -0.09
LIMK2P53671 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC14.48□□□□□ -0.09
LIMK2P53671 PPT1-213ENST00000641319 2388 ntBASIC14.48□□□□□ -0.09
LIMK2P53671 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.48□□□□□ -0.09
LIMK2P53671 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.48□□□□□ -0.09
LIMK2P53671 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK2P53671 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.48□□□□□ -0.09
LIMK2P53671 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
LIMK2P53671 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.48□□□□□ -0.09
LIMK2P53671 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
LIMK2P53671 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK2P53671 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
LIMK2P53671 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms