Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
EFNA3P52797 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
EFNA3P52797 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
EFNA3P52797 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
EFNA3P52797 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC13.4□□□□□ -0.26
EFNA3P52797 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.4□□□□□ -0.26
EFNA3P52797 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC13.39□□□□□ -0.27
EFNA3P52797 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
EFNA3P52797 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
EFNA3P52797 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.39□□□□□ -0.27
EFNA3P52797 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC13.39□□□□□ -0.27
EFNA3P52797 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC13.39□□□□□ -0.27
EFNA3P52797 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
EFNA3P52797 AL583805.1-201ENST00000391389 531 ntBASIC13.39□□□□□ -0.27
EFNA3P52797 MPV17-204ENST00000399052 749 ntTSL 4 BASIC13.39□□□□□ -0.27
EFNA3P52797 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.39□□□□□ -0.27
EFNA3P52797 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC13.39□□□□□ -0.27
EFNA3P52797 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC13.39□□□□□ -0.27
EFNA3P52797 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
EFNA3P52797 FGFR3P1-201ENST00000449999 601 ntBASIC13.39□□□□□ -0.27
EFNA3P52797 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.39□□□□□ -0.27
EFNA3P52797 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.39□□□□□ -0.27
EFNA3P52797 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC13.39□□□□□ -0.27
EFNA3P52797 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
EFNA3P52797 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.39□□□□□ -0.27
EFNA3P52797 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.39□□□□□ -0.27
EFNA3P52797 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 AC020910.6-201ENST00000623084 1459 ntBASIC13.39□□□□□ -0.27
EFNA3P52797 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.39□□□□□ -0.27
EFNA3P52797 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
EFNA3P52797 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.39□□□□□ -0.27
EFNA3P52797 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.39□□□□□ -0.27
EFNA3P52797 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
EFNA3P52797 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.39□□□□□ -0.27
EFNA3P52797 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.39□□□□□ -0.27
EFNA3P52797 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.39□□□□□ -0.27
EFNA3P52797 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
EFNA3P52797 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC13.39□□□□□ -0.27
EFNA3P52797 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
EFNA3P52797 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
EFNA3P52797 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
EFNA3P52797 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
EFNA3P52797 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
EFNA3P52797 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA3P52797 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA3P52797 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
EFNA3P52797 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA3P52797 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA3P52797 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.38□□□□□ -0.27
EFNA3P52797 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.38□□□□□ -0.27
EFNA3P52797 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.38□□□□□ -0.27
EFNA3P52797 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA3P52797 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
EFNA3P52797 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC13.38□□□□□ -0.27
EFNA3P52797 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA3P52797 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
EFNA3P52797 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA3P52797 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.38□□□□□ -0.27
EFNA3P52797 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA3P52797 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA3P52797 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA3P52797 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC13.38□□□□□ -0.27
EFNA3P52797 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
EFNA3P52797 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA3P52797 AL627231.1-201ENST00000394467 1125 ntBASIC13.38□□□□□ -0.27
EFNA3P52797 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA3P52797 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
EFNA3P52797 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.38□□□□□ -0.27
EFNA3P52797 AP000358.1-201ENST00000456260 156 ntBASIC13.38□□□□□ -0.27
EFNA3P52797 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.38□□□□□ -0.27
EFNA3P52797 AC019193.1-201ENST00000506678 823 ntBASIC13.38□□□□□ -0.27
EFNA3P52797 ALG1L13P-202ENST00000519320 584 ntBASIC13.38□□□□□ -0.27
EFNA3P52797 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC13.38□□□□□ -0.27
EFNA3P52797 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.38□□□□□ -0.27
EFNA3P52797 KRT8P1-201ENST00000557533 1207 ntBASIC13.38□□□□□ -0.27
EFNA3P52797 AC140658.4-201ENST00000561990 352 ntBASIC13.38□□□□□ -0.27
EFNA3P52797 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms