Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRE11P49959 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
MRE11P49959 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRE11P49959 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.84■□□□□ 0.29
MRE11P49959 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
MRE11P49959 MIR1247-201ENST00000408206 136 ntBASIC16.84■□□□□ 0.29
MRE11P49959 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MRE11P49959 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.84■□□□□ 0.29
MRE11P49959 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.84■□□□□ 0.29
MRE11P49959 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.84■□□□□ 0.29
MRE11P49959 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
MRE11P49959 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.84■□□□□ 0.29
MRE11P49959 AC027307.2-201ENST00000591252 911 ntBASIC16.84■□□□□ 0.29
MRE11P49959 AC016629.1-201ENST00000596579 586 ntBASIC16.84■□□□□ 0.29
MRE11P49959 AC243960.2-201ENST00000600996 747 ntBASIC16.84■□□□□ 0.29
MRE11P49959 AL118558.3-201ENST00000607414 1079 ntBASIC16.84■□□□□ 0.29
MRE11P49959 AC008267.7-201ENST00000624570 1194 ntBASIC16.84■□□□□ 0.29
MRE11P49959 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
MRE11P49959 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRE11P49959 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC16.84■□□□□ 0.29
MRE11P49959 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MRE11P49959 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MRE11P49959 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.84■□□□□ 0.29
MRE11P49959 PCDHA6-201ENST00000378126 3267 ntBASIC16.84■□□□□ 0.29
MRE11P49959 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRE11P49959 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
MRE11P49959 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRE11P49959 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRE11P49959 CD22-209ENST00000594250 2107 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MRE11P49959 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MRE11P49959 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
MRE11P49959 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
MRE11P49959 AC015819.3-201ENST00000624305 2674 ntBASIC16.83■□□□□ 0.29
MRE11P49959 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
MRE11P49959 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MRE11P49959 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MRE11P49959 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MRE11P49959 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
MRE11P49959 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
MRE11P49959 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRE11P49959 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRE11P49959 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MRE11P49959 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRE11P49959 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
MRE11P49959 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MRE11P49959 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.83■□□□□ 0.28
MRE11P49959 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.83■□□□□ 0.28
MRE11P49959 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRE11P49959 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
MRE11P49959 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRE11P49959 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC16.83■□□□□ 0.28
MRE11P49959 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRE11P49959 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.83■□□□□ 0.28
MRE11P49959 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRE11P49959 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.83■□□□□ 0.28
MRE11P49959 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.83■□□□□ 0.28
MRE11P49959 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.83■□□□□ 0.28
MRE11P49959 AC135586.1-201ENST00000539323 574 ntBASIC16.83■□□□□ 0.28
MRE11P49959 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
MRE11P49959 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC16.83■□□□□ 0.28
MRE11P49959 AP000842.3-202ENST00000569238 1080 ntBASIC16.83■□□□□ 0.28
MRE11P49959 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.83■□□□□ 0.28
MRE11P49959 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.83■□□□□ 0.28
MRE11P49959 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
MRE11P49959 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
MRE11P49959 BX324167.2-201ENST00000623717 3316 ntBASIC16.83■□□□□ 0.28
MRE11P49959 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRE11P49959 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRE11P49959 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
MRE11P49959 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MRE11P49959 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRE11P49959 AC010970.1-201ENST00000445125 1848 ntBASIC16.82■□□□□ 0.28
MRE11P49959 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MRE11P49959 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
MRE11P49959 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.82■□□□□ 0.28
MRE11P49959 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
MRE11P49959 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRE11P49959 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRE11P49959 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRE11P49959 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRE11P49959 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
MRE11P49959 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRE11P49959 AC087499.5-201ENST00000452760 1342 ntBASIC16.82■□□□□ 0.28
MRE11P49959 TUBB8P4-201ENST00000511806 1324 ntBASIC16.82■□□□□ 0.28
MRE11P49959 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRE11P49959 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRE11P49959 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
MRE11P49959 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.82■□□□□ 0.28
MRE11P49959 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
MRE11P49959 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.82■□□□□ 0.28
MRE11P49959 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.82■□□□□ 0.28
MRE11P49959 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.82■□□□□ 0.28
MRE11P49959 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
MRE11P49959 AC074338.1-201ENST00000416825 156 ntBASIC16.82■□□□□ 0.28
MRE11P49959 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.82■□□□□ 0.28
MRE11P49959 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.82■□□□□ 0.28
MRE11P49959 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.82■□□□□ 0.28
MRE11P49959 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.82■□□□□ 0.28
MRE11P49959 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC16.82■□□□□ 0.28
MRE11P49959 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms