Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CENPAP49450 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.14□□□□□ -0.31
CENPAP49450 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.14□□□□□ -0.31
CENPAP49450 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.14□□□□□ -0.31
CENPAP49450 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CENPAP49450 AL355385.1-201ENST00000606123 409 ntBASIC13.14□□□□□ -0.31
CENPAP49450 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.14□□□□□ -0.31
CENPAP49450 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.14□□□□□ -0.31
CENPAP49450 AP001002.3-201ENST00000623482 206 ntBASIC13.14□□□□□ -0.31
CENPAP49450 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.14□□□□□ -0.31
CENPAP49450 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.14□□□□□ -0.31
CENPAP49450 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 MYO18B-202ENST00000407587 8090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CENPAP49450 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CENPAP49450 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CENPAP49450 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
CENPAP49450 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.14□□□□□ -0.31
CENPAP49450 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CENPAP49450 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CENPAP49450 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC13.13□□□□□ -0.31
CENPAP49450 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CENPAP49450 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC13.13□□□□□ -0.31
CENPAP49450 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CENPAP49450 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.13□□□□□ -0.31
CENPAP49450 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CENPAP49450 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CENPAP49450 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CENPAP49450 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CENPAP49450 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
CENPAP49450 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 KHSRPP1-201ENST00000427983 1768 ntBASIC13.13□□□□□ -0.31
CENPAP49450 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CENPAP49450 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.13□□□□□ -0.31
CENPAP49450 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC13.13□□□□□ -0.31
CENPAP49450 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 RN7SKP230-201ENST00000365642 335 ntBASIC13.13□□□□□ -0.31
CENPAP49450 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.13□□□□□ -0.31
CENPAP49450 ACTG1P3-201ENST00000431775 1114 ntBASIC13.13□□□□□ -0.31
CENPAP49450 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.13□□□□□ -0.31
CENPAP49450 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.13□□□□□ -0.31
CENPAP49450 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.13□□□□□ -0.31
CENPAP49450 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.13□□□□□ -0.31
CENPAP49450 SORD2P-201ENST00000558556 1069 ntBASIC13.13□□□□□ -0.31
CENPAP49450 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.13□□□□□ -0.31
CENPAP49450 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.13□□□□□ -0.31
CENPAP49450 AC138466.3-201ENST00000619983 221 ntBASIC13.13□□□□□ -0.31
CENPAP49450 SPECC1-206ENST00000395530 8133 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CENPAP49450 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CENPAP49450 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CENPAP49450 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CENPAP49450 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CENPAP49450 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CENPAP49450 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CENPAP49450 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 XIRP1-201ENST00000340369 6460 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CENPAP49450 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CENPAP49450 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms