Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ARCN1P48444 USP39-220ENST00000613444 2161 ntTSL 2 BASIC14.37□□□□□ -0.11
ARCN1P48444 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ARCN1P48444 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ARCN1P48444 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
ARCN1P48444 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ARCN1P48444 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
ARCN1P48444 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ARCN1P48444 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.37□□□□□ -0.11
ARCN1P48444 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ARCN1P48444 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ARCN1P48444 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC14.36□□□□□ -0.11
ARCN1P48444 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ARCN1P48444 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.36□□□□□ -0.11
ARCN1P48444 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC14.36□□□□□ -0.11
ARCN1P48444 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ARCN1P48444 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
ARCN1P48444 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.36□□□□□ -0.11
ARCN1P48444 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.36□□□□□ -0.11
ARCN1P48444 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ARCN1P48444 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.36□□□□□ -0.11
ARCN1P48444 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ARCN1P48444 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ARCN1P48444 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ARCN1P48444 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ARCN1P48444 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ARCN1P48444 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC14.36□□□□□ -0.11
ARCN1P48444 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
ARCN1P48444 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
ARCN1P48444 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
ARCN1P48444 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ARCN1P48444 VDAC1P1-201ENST00000439229 848 ntBASIC14.36□□□□□ -0.11
ARCN1P48444 OR2R1P-201ENST00000441404 914 ntBASIC14.36□□□□□ -0.11
ARCN1P48444 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.36□□□□□ -0.11
ARCN1P48444 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.36□□□□□ -0.11
ARCN1P48444 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.36□□□□□ -0.11
ARCN1P48444 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ARCN1P48444 AL512310.5-201ENST00000551999 515 ntBASIC14.36□□□□□ -0.11
ARCN1P48444 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.36□□□□□ -0.11
ARCN1P48444 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC14.36□□□□□ -0.11
ARCN1P48444 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
ARCN1P48444 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.36□□□□□ -0.11
ARCN1P48444 AC244093.1-201ENST00000610837 814 ntBASIC14.36□□□□□ -0.11
ARCN1P48444 AL008638.5-201ENST00000623814 1298 ntBASIC14.36□□□□□ -0.11
ARCN1P48444 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.36□□□□□ -0.11
ARCN1P48444 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ARCN1P48444 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC14.36□□□□□ -0.11
ARCN1P48444 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ARCN1P48444 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ARCN1P48444 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ARCN1P48444 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ARCN1P48444 GRN-222ENST00000639447 1314 ntTSL 2 BASIC14.36□□□□□ -0.11
ARCN1P48444 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
ARCN1P48444 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ARCN1P48444 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ARCN1P48444 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
ARCN1P48444 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.36□□□□□ -0.11
ARCN1P48444 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
ARCN1P48444 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.36□□□□□ -0.11
ARCN1P48444 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ARCN1P48444 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ARCN1P48444 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.35□□□□□ -0.11
ARCN1P48444 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
ARCN1P48444 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.35□□□□□ -0.11
ARCN1P48444 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARCN1P48444 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.35□□□□□ -0.11
ARCN1P48444 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARCN1P48444 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.35□□□□□ -0.11
ARCN1P48444 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ARCN1P48444 NCLP1-201ENST00000445357 1963 ntBASIC14.35□□□□□ -0.11
ARCN1P48444 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ARCN1P48444 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
ARCN1P48444 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARCN1P48444 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARCN1P48444 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARCN1P48444 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ARCN1P48444 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARCN1P48444 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ARCN1P48444 MIR663B-201ENST00000408361 115 ntBASIC14.35□□□□□ -0.11
ARCN1P48444 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ARCN1P48444 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.35□□□□□ -0.11
ARCN1P48444 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ARCN1P48444 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
ARCN1P48444 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.35□□□□□ -0.11
ARCN1P48444 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.35□□□□□ -0.11
ARCN1P48444 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.35□□□□□ -0.11
ARCN1P48444 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC14.35□□□□□ -0.11
ARCN1P48444 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.35□□□□□ -0.11
ARCN1P48444 AL022328.3-201ENST00000607943 679 ntBASIC14.35□□□□□ -0.11
ARCN1P48444 AP000346.4-201ENST00000614827 381 ntBASIC14.35□□□□□ -0.11
ARCN1P48444 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARCN1P48444 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARCN1P48444 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARCN1P48444 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARCN1P48444 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARCN1P48444 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARCN1P48444 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARCN1P48444 AC073548.1-201ENST00000624088 1882 ntBASIC14.35□□□□□ -0.11
ARCN1P48444 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
ARCN1P48444 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms