Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AL161773.1-201ENST00000624845 863 ntBASIC15.17■□□□□ 0.02
BRCC3P46736 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRCC3P46736 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BRCC3P46736 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.17■□□□□ 0.02
BRCC3P46736 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRCC3P46736 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRCC3P46736 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRCC3P46736 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.17■□□□□ 0.02
BRCC3P46736 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.17■□□□□ 0.02
BRCC3P46736 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
BRCC3P46736 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRCC3P46736 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRCC3P46736 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRCC3P46736 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
BRCC3P46736 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
BRCC3P46736 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.16■□□□□ 0.02
BRCC3P46736 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
BRCC3P46736 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
BRCC3P46736 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.16■□□□□ 0.02
BRCC3P46736 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRCC3P46736 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRCC3P46736 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.16■□□□□ 0.02
BRCC3P46736 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRCC3P46736 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRCC3P46736 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.16■□□□□ 0.02
BRCC3P46736 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRCC3P46736 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.16■□□□□ 0.02
BRCC3P46736 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.16■□□□□ 0.02
BRCC3P46736 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRCC3P46736 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRCC3P46736 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRCC3P46736 PYY2-201ENST00000315776 282 ntBASIC15.16■□□□□ 0.02
BRCC3P46736 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRCC3P46736 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
BRCC3P46736 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRCC3P46736 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
BRCC3P46736 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRCC3P46736 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC15.16■□□□□ 0.02
BRCC3P46736 RN7SKP109-201ENST00000410592 316 ntBASIC15.16■□□□□ 0.02
BRCC3P46736 BX679664.3-201ENST00000414070 555 ntBASIC15.16■□□□□ 0.02
BRCC3P46736 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.16■□□□□ 0.02
BRCC3P46736 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.16■□□□□ 0.02
BRCC3P46736 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC15.16■□□□□ 0.02
BRCC3P46736 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRCC3P46736 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.16■□□□□ 0.02
BRCC3P46736 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC15.16■□□□□ 0.02
BRCC3P46736 AC113935.1-201ENST00000471722 555 ntBASIC15.16■□□□□ 0.02
BRCC3P46736 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC15.16■□□□□ 0.02
BRCC3P46736 RNA5SP417-201ENST00000516459 108 ntBASIC15.16■□□□□ 0.02
BRCC3P46736 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC15.16■□□□□ 0.02
BRCC3P46736 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC15.16■□□□□ 0.02
BRCC3P46736 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC15.16■□□□□ 0.02
BRCC3P46736 AP000911.2-201ENST00000534330 502 ntBASIC15.16■□□□□ 0.02
BRCC3P46736 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC15.16■□□□□ 0.02
BRCC3P46736 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.16■□□□□ 0.02
BRCC3P46736 CR383656.3-201ENST00000551315 183 ntBASIC15.16■□□□□ 0.02
BRCC3P46736 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC15.16■□□□□ 0.02
BRCC3P46736 MIR2392-201ENST00000584881 84 ntBASIC15.16■□□□□ 0.02
BRCC3P46736 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC15.16■□□□□ 0.02
BRCC3P46736 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
BRCC3P46736 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC15.16■□□□□ 0.02
BRCC3P46736 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRCC3P46736 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
BRCC3P46736 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRCC3P46736 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.16■□□□□ 0.02
BRCC3P46736 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.16■□□□□ 0.02
BRCC3P46736 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRCC3P46736 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRCC3P46736 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
BRCC3P46736 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
BRCC3P46736 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRCC3P46736 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRCC3P46736 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
BRCC3P46736 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
BRCC3P46736 IL9RP3-201ENST00000442856 1674 ntBASIC15.16■□□□□ 0.02
BRCC3P46736 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.16■□□□□ 0.02
BRCC3P46736 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC15.15■□□□□ 0.02
BRCC3P46736 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BRCC3P46736 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
BRCC3P46736 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.15■□□□□ 0.02
BRCC3P46736 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
BRCC3P46736 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.15■□□□□ 0.02
BRCC3P46736 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
BRCC3P46736 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BRCC3P46736 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
BRCC3P46736 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
BRCC3P46736 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BRCC3P46736 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
BRCC3P46736 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BRCC3P46736 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
BRCC3P46736 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
BRCC3P46736 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
BRCC3P46736 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.15■□□□□ 0.02
BRCC3P46736 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.15■□□□□ 0.02
BRCC3P46736 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
BRCC3P46736 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
BRCC3P46736 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC15.15■□□□□ 0.02
BRCC3P46736 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.15■□□□□ 0.02
BRCC3P46736 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC15.15■□□□□ 0.02
BRCC3P46736 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms