Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.11■□□□□ 0.01
GRIK1P39086 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GRIK1P39086 HSPA8P5-201ENST00000456928 2069 ntBASIC15.11■□□□□ 0.01
GRIK1P39086 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.11■□□□□ 0.01
GRIK1P39086 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GRIK1P39086 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.11■□□□□ 0.01
GRIK1P39086 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GRIK1P39086 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC15.11■□□□□ 0.01
GRIK1P39086 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GRIK1P39086 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
GRIK1P39086 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.11■□□□□ 0.01
GRIK1P39086 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
GRIK1P39086 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
GRIK1P39086 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GRIK1P39086 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.11■□□□□ 0.01
GRIK1P39086 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
GRIK1P39086 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
GRIK1P39086 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
GRIK1P39086 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
GRIK1P39086 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
GRIK1P39086 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
GRIK1P39086 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GRIK1P39086 KRT8P31-201ENST00000504812 1408 ntBASIC15.1■□□□□ 0.01
GRIK1P39086 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GRIK1P39086 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.1■□□□□ 0.01
GRIK1P39086 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GRIK1P39086 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GRIK1P39086 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GRIK1P39086 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.1■□□□□ 0.01
GRIK1P39086 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GRIK1P39086 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.1■□□□□ 0.01
GRIK1P39086 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.1■□□□□ 0.01
GRIK1P39086 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC15.1■□□□□ 0.01
GRIK1P39086 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GRIK1P39086 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GRIK1P39086 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC15.1■□□□□ 0.01
GRIK1P39086 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
GRIK1P39086 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.1■□□□□ 0.01
GRIK1P39086 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GRIK1P39086 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GRIK1P39086 AL807761.2-201ENST00000422849 729 ntBASIC15.1■□□□□ 0.01
GRIK1P39086 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.1■□□□□ 0.01
GRIK1P39086 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.1■□□□□ 0.01
GRIK1P39086 AC019193.1-201ENST00000506678 823 ntBASIC15.1■□□□□ 0.01
GRIK1P39086 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.1■□□□□ 0.01
GRIK1P39086 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.1■□□□□ 0.01
GRIK1P39086 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.1■□□□□ 0.01
GRIK1P39086 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC15.1■□□□□ 0.01
GRIK1P39086 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.1■□□□□ 0.01
GRIK1P39086 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC15.1■□□□□ 0.01
GRIK1P39086 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GRIK1P39086 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GRIK1P39086 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GRIK1P39086 AL022313.4-201ENST00000562756 2046 ntBASIC15.1■□□□□ 0.01
GRIK1P39086 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
GRIK1P39086 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.1■□□□□ 0.01
GRIK1P39086 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.1■□□□□ 0.01
GRIK1P39086 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GRIK1P39086 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC15.1■□□□□ 0.01
GRIK1P39086 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GRIK1P39086 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GRIK1P39086 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.1■□□□□ 0.01
GRIK1P39086 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.1■□□□□ 0.01
GRIK1P39086 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GRIK1P39086 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
GRIK1P39086 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GRIK1P39086 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GRIK1P39086 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
GRIK1P39086 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GRIK1P39086 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.09■□□□□ 0.01
GRIK1P39086 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
GRIK1P39086 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.09■□□□□ 0.01
GRIK1P39086 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GRIK1P39086 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC15.09■□□□□ 0.01
GRIK1P39086 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
GRIK1P39086 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GRIK1P39086 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GRIK1P39086 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GRIK1P39086 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GRIK1P39086 AC092506.1-202ENST00000401022 528 ntBASIC15.09■□□□□ 0.01
GRIK1P39086 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GRIK1P39086 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
GRIK1P39086 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.09■□□□□ 0.01
GRIK1P39086 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC15.09■□□□□ 0.01
GRIK1P39086 FTLP1-201ENST00000449155 526 ntBASIC15.09■□□□□ 0.01
GRIK1P39086 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GRIK1P39086 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.09■□□□□ 0.01
GRIK1P39086 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.09■□□□□ 0.01
GRIK1P39086 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC15.09■□□□□ 0.01
GRIK1P39086 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
GRIK1P39086 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC15.09■□□□□ 0.01
GRIK1P39086 SIGLEC18P-201ENST00000602271 909 ntBASIC15.09■□□□□ 0.01
GRIK1P39086 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
GRIK1P39086 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.09■□□□□ 0.01
GRIK1P39086 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
GRIK1P39086 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.09■□□□□ 0.01
GRIK1P39086 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GRIK1P39086 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.09■□□□□ 0.01
GRIK1P39086 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
GRIK1P39086 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.09■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms